RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CACNG8Q8WXS5 425 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 TAF15Q92804 592 aaKnown RBP eCLIP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 RPEQ96AT9 228 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 C1orf159Q96HA4 380 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 SRSF8Q9BRL6 282 aaKnown RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 COMMD5Q9GZQ3 224 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 MS4A7Q9GZW8 240 aaPredicted RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 NPVFQ9HCQ7 196 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 NDUFA4L2Q9NRX3 87 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 UQCC1Q9NVA1 299 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 FBXO7Q9Y3I1 522 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 MINOS1-NBL1R4GNA1 71 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 VWFP04275 2813 aa4.36□□□□□ -1.71
COL17A1-206ENST00000483876 YLPM1P49750 1951 aaKnown RBP4.36□□□□□ -1.71
COL17A1-206ENST00000483876 IGHV2-70DA0A0C4DH43 119 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 C17orf112F2Z3M2 114 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 RNASEK-C17orf49H0YIS7 233 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 H3BP45 60 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 NDUFS7O75251 213 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 NXPH3O95157 252 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 IGHV4-39P01824 125 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 PRH1P02810 166 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 H2AFB1P0C5Y9 115 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 SAA1P0DJI8 122 aaPredicted RBP4.35□□□□□ -1.71
COL17A1-206ENST00000483876 M6PRP20645 277 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 ZFP36P26651 326 aaKnown RBP4.35□□□□□ -1.71
COL17A1-206ENST00000483876 SNCAP37840 140 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 UBE2E1P51965 193 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 SUB1P53999 127 aaKnown RBP eCLIP4.35□□□□□ -1.71
COL17A1-206ENST00000483876 ARF6P62330 175 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 ERHP84090 104 aaKnown RBP4.35□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM267Q0VDI3 215 aaPredicted RBP4.35□□□□□ -1.71
COL17A1-206ENST00000483876 RAB31Q13636 194 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 EBI3Q14213 229 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 PEA15Q15121 130 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 TOR2AQ5JU69 321 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 TPTE2P1Q5T6R2 138 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 DMRTA1Q5VZB9 504 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 OR8G2PQ6IF36 304 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 HCP5Q6MZN7 132 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 SLC25A24Q6NUK1 477 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 MMD2Q8IY49 270 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 PNKDQ8N490 385 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 SLC24A4Q8NFF2 622 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 NPBQ8NG41 125 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 RNASEH2CQ8TDP1 164 aaKnown RBP4.35□□□□□ -1.71
COL17A1-206ENST00000483876 ZDHHC16Q969W1 377 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 MALSU1Q96EH3 234 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 PBDC1Q9BVG4 233 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 SIRPDQ9H106 197 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 SH3BGRL3Q9H299 93 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 HRH4Q9H3N8 390 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 LPAR2Q9HBW0 351 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 KCNIP2Q9NS61 270 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 ONECUT1Q9UBC0 465 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 WDR83OSQ9Y284 106 aa4.35□□□□□ -1.71
COL17A1-206ENST00000483876 TBL2Q9Y4P3 447 aaKnown RBP4.35□□□□□ -1.71
COL17A1-206ENST00000483876 A0A1W2PPI3 338 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 RRHO14718 337 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 CA2P00918 260 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 IFNA4P05014 189 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 SNRNP70P08621 437 aaKnown RBP4.34□□□□□ -1.71
COL17A1-206ENST00000483876 NPY1RP25929 384 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 TAGLN2P37802 199 aaKnown RBP4.34□□□□□ -1.71
COL17A1-206ENST00000483876 OPRK1P41145 380 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 REG1BP48304 166 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 HOXA1P49639 335 aaPredicted RBP4.34□□□□□ -1.71
COL17A1-206ENST00000483876 PAX8Q06710 450 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 DIAPH2-AS1Q14236 149 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 PSG5Q15238 335 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 PRSS8Q16651 343 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 CLEC12BQ2HXU8 276 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 MRGPRG-AS1Q2M3A8 158 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM41BQ5BJD5 291 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM182Q6ZP80 229 aaPredicted RBP4.34□□□□□ -1.71
COL17A1-206ENST00000483876 IL17RELQ6ZVW7 336 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM144Q7Z5S9 345 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 MOB3BQ86TA1 216 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 PPP1R27Q86WC6 154 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 CCDC28AQ8IWP9 274 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 ZNF709Q8N972 641 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 ZNF114Q8NC26 417 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 BPIFCQ8NFQ6 507 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 OR10G4Q8NGN3 311 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 CLDND2Q8NHS1 167 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 C10orf105Q8TEF2 133 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 TMEM170AQ8WVE7 144 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 FAM168AQ92567 244 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 PIMREGQ9BSJ6 248 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 SCRT1Q9BWW7 348 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 SEC11CQ9BY50 192 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 NPCDR1Q9BY65 106 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 BPESC1Q9GZL8 116 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 ZNF430Q9H8G1 570 aaPredicted RBP4.34□□□□□ -1.71
COL17A1-206ENST00000483876 RPRMQ9NS64 109 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 KIAA1456Q9P272 454 aa4.34□□□□□ -1.71
COL17A1-206ENST00000483876 CARHSP1Q9Y2V2 147 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms