RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ATP6V0BQ99437 205 aa7.8□□□□□ -1.16
SMARCC1-205ENST00000483847 CENPOQ9BU64 300 aa7.8□□□□□ -1.16
SMARCC1-205ENST00000483847 TMEM140Q9NV12 185 aa7.8□□□□□ -1.16
SMARCC1-205ENST00000483847 F11RQ9Y624 299 aaKnown RBP7.8□□□□□ -1.16
SMARCC1-205ENST00000483847 DNAH5Q8TE73 4624 aa7.8□□□□□ -1.16
SMARCC1-205ENST00000483847 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 TRAV14DV4A0A0A6YYC5 116 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 IGHV3-66A0A0C4DH42 116 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 KNCNA6PVL3 124 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 ARL6IP5O75915 188 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 DFFBO76075 338 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 CTXN2P0C2S0 81 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 PTHLHP12272 177 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 TAS2R31P59538 309 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 PAFAH1B2P68402 229 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 TNP2Q05952 138 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 POU2AF1Q16633 256 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 SOHLH1Q5JUK2 328 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 UBE2DNLQ8IWF7 75 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 NUDCD2Q8WVJ2 157 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 SECTM1Q8WVN6 248 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 HINT2Q9BX68 163 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 TBC1D24Q9ULP9 559 aa7.79□□□□□ -1.16
SMARCC1-205ENST00000483847 DNASE2O00115 360 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 ST8SIA3O43173 380 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 RBFOX2O43251 390 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 IFNA21P01568 189 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 IFNA17P01571 189 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 IGHV3-48P01763 117 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 NQO2P16083 231 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 RAB6AP20340 208 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 FABP5Q01469 135 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 RELQ04864 619 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 CDNFQ49AH0 187 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 CNIH2Q6PI25 160 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 C8orf59Q8N0T1 100 aaPredicted RBP7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 UFD1Q92890 307 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 AIFM2Q9BRQ8 373 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 ATG5Q9H1Y0 275 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 VSIRQ9H7M9 311 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 SCRT2Q9NQ03 307 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 NDUFA4L2Q9NRX3 87 aa7.78□□□□□ -1.16
SMARCC1-205ENST00000483847 PTGES3LE9PB15 166 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 SSX5O60225 188 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 HPRT1P00492 218 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 HSMCR30P0CW71 290 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 SPP1P10451 314 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 RPL11P62913 178 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 TMEM41BQ5BJD5 291 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 HACD4Q5VWC8 232 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 THOC7Q6I9Y2 204 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 MORN3Q6PF18 240 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 HSD17B13Q7Z5P4 300 aaPredicted RBP7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 DMBX1Q8NFW5 382 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 OR1L8Q8NGR8 309 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 LSM10Q969L4 123 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 SLC25A46Q96AG3 418 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 NXF2Q9GZY0 626 aaKnown RBP7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 DCSTAMPQ9H295 470 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 TMEM14BQ9NUH8 114 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 RABAC1Q9UI14 185 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 ANXA10Q9UJ72 324 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 NSG2Q9Y328 171 aa7.77□□□□□ -1.17
SMARCC1-205ENST00000483847 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 METTL21EPA6NDL7 271 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 TMEM235A6NFC5 223 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 IFITM5A6NNB3 132 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 I3L2K1 104 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 FGF2P09038 288 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 UBE2UQ5VVX9 321 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 TOMM20LQ6UXN7 152 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 C10orf67Q8IYJ2 551 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 OR13F1Q8NGS4 319 aa7.76□□□□□ -1.17
SMARCC1-205ENST00000483847 DBX1A6NMT0 343 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 K7EQG2 157 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 CD5P06127 495 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 EIF4EP06730 217 aaKnown RBP7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 ZNF688P0C7X2 276 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 FCGR2CP31995 323 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 MFAP4P55083 255 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 TRAM1Q15629 374 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 MSMO1Q15800 293 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 ACTL10Q5JWF8 245 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 DUSP18Q8NEJ0 188 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 OR51H1Q8NH63 302 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 SLC5A7Q9GZV3 580 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 PLEKHA2Q9HB19 425 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 OR51B2Q9Y5P1 312 aa7.75□□□□□ -1.17
SMARCC1-205ENST00000483847 MARCH11A6NNE9 402 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 MT-CO2P00403 227 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 PPYP01298 95 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 PSMA1P25786 263 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 NPY1RP25929 384 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 RANBP1P43487 201 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 CATR1Q13166 79 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 ARL6IP1Q15041 203 aa7.74□□□□□ -1.17
SMARCC1-205ENST00000483847 RNF212Q495C1 297 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms