RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 RBPMSQ93062 196 aaKnown RBP13.76□□□□□ -0.21
HDAC6-225ENST00000483506 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
HDAC6-225ENST00000483506 HINT2Q9BX68 163 aa13.76□□□□□ -0.21
HDAC6-225ENST00000483506 TMEM56-RWDD3S4R434 201 aa13.76□□□□□ -0.21
HDAC6-225ENST00000483506 A0A0G2JRQ6 117 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 MFSD2BA6NFX1 497 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 INS-IGF2F8WCM5 200 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 MFAP2P55001 183 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 SYNJ2BPP57105 145 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 IZUMO4Q1ZYL8 232 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 SGPP2Q8IWX5 399 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 OR2C3Q8N628 320 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 OR1P1Q8NH06 330 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 ZNF502Q8TBZ5 544 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 VN1R17PQ8TDU5 208 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 IL22RA2Q969J5 263 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 ATP6V0BQ99437 205 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 SDHCQ99643 169 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-225ENST00000483506 SIGLEC8Q9NYZ4 499 aa13.75□□□□□ -0.21
HDAC6-225ENST00000483506 GGCTO75223 188 aaKnown RBP13.74□□□□□ -0.21
HDAC6-225ENST00000483506 SUPT4H1P63272 117 aaKnown RBP13.74□□□□□ -0.21
HDAC6-225ENST00000483506 TMEM187Q14656 261 aa13.74□□□□□ -0.21
HDAC6-225ENST00000483506 BAK1Q16611 211 aa13.74□□□□□ -0.21
HDAC6-225ENST00000483506 TATDN3Q17R31 274 aa13.74□□□□□ -0.21
HDAC6-225ENST00000483506 SELENOHQ8IZQ5 122 aaKnown RBP13.74□□□□□ -0.21
HDAC6-225ENST00000483506 RRNAD1Q96FB5 475 aaKnown RBP13.74□□□□□ -0.21
HDAC6-225ENST00000483506 OR4C12Q96R67 309 aa13.74□□□□□ -0.21
HDAC6-225ENST00000483506 SLC25A21Q9BQT8 299 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-225ENST00000483506 ZNF256Q9Y2P7 627 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-225ENST00000483506 KCNIP3Q9Y2W7 256 aa13.74□□□□□ -0.21
HDAC6-225ENST00000483506 PPP5D1E7EU14 171 aa13.73□□□□□ -0.21
HDAC6-225ENST00000483506 ST8SIA3O43173 380 aa13.73□□□□□ -0.21
HDAC6-225ENST00000483506 IGLV1-51P01701 117 aa13.73□□□□□ -0.21
HDAC6-225ENST00000483506 MECP2P51608 486 aaKnown RBP13.73□□□□□ -0.21
HDAC6-225ENST00000483506 DCTN2Q13561 401 aaKnown RBP13.73□□□□□ -0.21
HDAC6-225ENST00000483506 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
HDAC6-225ENST00000483506 PLEKHA3Q9HB20 300 aa13.73□□□□□ -0.21
HDAC6-225ENST00000483506 LGALS9O00182 355 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 IGHV3-23P01764 117 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 ARL3P36405 182 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 SLC25A24Q6NUK1 477 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 Q6ZRM9 215 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 LINC00299Q6ZSB3 139 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 GPHB5Q86YW7 130 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 S4R3C0 116 aa13.72□□□□□ -0.21
HDAC6-225ENST00000483506 NAP1L6A6NFF2 107 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 A6NHS1 94 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 K7EIM0 57 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 CSN3P07498 182 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 TMEM268Q5VZI3 342 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 TRIQKQ629K1 86 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-225ENST00000483506 OR52E5Q8NH55 327 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 RNASE11Q8TAA1 199 aaKnown RBP13.71□□□□□ -0.21
HDAC6-225ENST00000483506 PRR25Q96S07 402 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 PEMTQ9UBM1 199 aa13.71□□□□□ -0.21
HDAC6-225ENST00000483506 LSM4Q9Y4Z0 139 aaKnown RBP13.71□□□□□ -0.21
HDAC6-225ENST00000483506 OR2C1O95371 312 aa13.7□□□□□ -0.22
HDAC6-225ENST00000483506 CLEC3BP05452 202 aa13.7□□□□□ -0.22
HDAC6-225ENST00000483506 AKR1C4P17516 323 aa13.7□□□□□ -0.22
HDAC6-225ENST00000483506 SRPXP78539 464 aa13.7□□□□□ -0.22
HDAC6-225ENST00000483506 ERHP84090 104 aaKnown RBP13.7□□□□□ -0.22
HDAC6-225ENST00000483506 TMEM128Q5BJH2 165 aa13.7□□□□□ -0.22
HDAC6-225ENST00000483506 PVRIGQ6DKI7 326 aa13.7□□□□□ -0.22
HDAC6-225ENST00000483506 SLC35G3Q8N808 338 aa13.7□□□□□ -0.22
HDAC6-225ENST00000483506 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-225ENST00000483506 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 A8MWP6 167 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 F8W735 103 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-225ENST00000483506 IFNA17P01571 189 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 HLA-AP01891 365 aaKnown RBP13.69□□□□□ -0.22
HDAC6-225ENST00000483506 ANXA3P12429 323 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 SPNP16150 400 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 GPR183P32249 361 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 SPCS3P61009 180 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 RBMS2Q15434 407 aaKnown RBP13.69□□□□□ -0.22
HDAC6-225ENST00000483506 SCARB1Q8WTV0 552 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 GPR146Q96CH1 333 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 C7orf50Q9BRJ6 194 aaKnown RBP13.69□□□□□ -0.22
HDAC6-225ENST00000483506 PDCD10Q9BUL8 212 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 C21orf62Q9NYP8 219 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 CACNG5Q9UF02 275 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
HDAC6-225ENST00000483506 I3L2K1 104 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 TGOLN2O43493 480 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 IL7P13232 177 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 FCGR2BP31994 310 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-225ENST00000483506 INPP1P49441 399 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 BSXQ3C1V8 233 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 NMSQ5H8A3 153 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 ADAMTSL5Q6ZMM2 481 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 TMED4Q7Z7H5 227 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 LGI3Q8N145 548 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 BSCL2Q96G97 398 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-225ENST00000483506 ZNF436Q9C0F3 470 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-225ENST00000483506 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
HDAC6-225ENST00000483506 DUXBA0A1W2PPF3 345 aa13.67□□□□□ -0.22
HDAC6-225ENST00000483506 GP9P14770 177 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms