RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RFPL3SP0C7P2 107 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 HOXA4Q00056 320 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-205ENST00000483122 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 OR52E5Q8NH55 327 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 ZNF503Q96F45 646 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 SAP30LQ9HAJ7 183 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 SH2D2AQ9NP31 389 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 MPC1Q9Y5U8 109 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 PTPRBP23467 1997 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 PSPNO60542 156 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 IGFBP2P18065 325 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 ARR3P36575 388 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 SSR4P51571 173 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 TMPRSS3P57727 454 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 LYSMD4Q5XG99 296 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 FER1L6-AS1Q8NA97 138 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 Q8TCH9 128 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 WIPF2Q8TF74 440 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-205ENST00000483122 MCRIP2Q9BUT9 160 aaKnown RBP9.73□□□□□ -0.85
VTI1A-205ENST00000483122 COMMD5Q9GZQ3 224 aa9.73□□□□□ -0.85
VTI1A-205ENST00000483122 TFF1P04155 84 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 P04436 131 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 WIPI1Q5MNZ9 446 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-205ENST00000483122 PRAMEF5Q5TYX0 476 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 PRAMEF6Q5VXH4 476 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 SLC25A45Q8N413 288 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 FAM216AQ8WUB2 273 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 SCRT2Q9NQ03 307 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 FSCN3Q9NQT6 498 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 ZNF835Q9Y2P0 537 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 J3QR06 171 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 PPOXP50336 477 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 NXPH1P58417 271 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 ERVK11-1P61568 191 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 AESQ08117 197 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 SLC35E4Q6ICL7 350 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 TEPPQ6URK8 271 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 NUP35Q8NFH5 326 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 OR1B1Q8NGR6 318 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 OR4A16Q8NH70 328 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 LINC00479Q96M42 142 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 HSD17B10Q99714 261 aaKnown RBP9.72□□□□□ -0.85
VTI1A-205ENST00000483122 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
VTI1A-205ENST00000483122 PSG11Q9UQ72 335 aa9.72□□□□□ -0.85
VTI1A-205ENST00000483122 WDR87Q6ZQQ6 2873 aa9.71□□□□□ -0.85
VTI1A-205ENST00000483122 C21orf140B9A014 251 aa9.71□□□□□ -0.85
VTI1A-205ENST00000483122 SYS1-DBNDD2H3BUS1 97 aa9.71□□□□□ -0.85
VTI1A-205ENST00000483122 FCGR3BO75015 233 aa9.71□□□□□ -0.85
VTI1A-205ENST00000483122 MRPL33O75394 65 aaKnown RBP9.71□□□□□ -0.85
VTI1A-205ENST00000483122 CD24P25063 80 aa9.71□□□□□ -0.85
VTI1A-205ENST00000483122 CAMPP49913 170 aa9.71□□□□□ -0.85
VTI1A-205ENST00000483122 FAM234AQ9H0X4 552 aa9.71□□□□□ -0.85
VTI1A-205ENST00000483122 TMEM30CPA0ZSE6 113 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 CRXO43186 299 aaPredicted RBP9.71□□□□□ -0.86
VTI1A-205ENST00000483122 PAX2Q02962 417 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 FOXF2Q12947 444 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 SMIM21Q3B7S5 101 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 PRSS33Q8NF86 280 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 RFESDQ8TAC1 157 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 SLC25A40Q8TBP6 338 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 MBD6Q96DN6 1003 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 PLPPR2Q96GM1 343 aa9.71□□□□□ -0.86
VTI1A-205ENST00000483122 IGHV1-45A0A0A0MS14 117 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 FAM231BA6NCW3 169 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 GAGE10A6NGK3 116 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 G3V4G9 280 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 OR7C2O60412 319 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 GOSR1O95249 250 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PRR20EP86478 221 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PRR20CP86479 221 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PRR20DP86480 221 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PRR20BP86481 221 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PRR20AP86496 221 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 TCF15Q12870 199 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 GABRA6Q16445 453 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-205ENST00000483122 TPRX1Q8N7U7 411 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 WDR31Q8NA23 367 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 FNDC4Q9H6D8 234 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-205ENST00000483122 TMEM167BQ9NRX6 74 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 SLC25A10Q9UBX3 287 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-205ENST00000483122 DOCK7Q96N67 2140 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 C7orf71A4D174 169 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PROP1O75360 226 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 OR2J3O76001 311 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 HAND1O96004 215 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 ZNF146Q15072 292 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 NRN1LQ496H8 165 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 MRPL14Q6P1L8 145 aaKnown RBP9.7□□□□□ -0.86
VTI1A-205ENST00000483122 RASL11AQ6T310 242 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 SVIPQ8NHG7 77 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 IMMP1LQ96LU5 166 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 NABP2Q9BQ15 211 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 CHRDL1Q9BU40 450 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 WDR54Q9H977 334 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 PLEKHA3Q9HB20 300 aa9.7□□□□□ -0.86
VTI1A-205ENST00000483122 C1RLQ9NZP8 487 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms