RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 FAM71F2Q6NXP2 309 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 SPSB3Q6PJ21 355 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 C8orf31Q8N9H6 132 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 CLDND2Q8NHS1 167 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 MRPL53Q96EL3 112 aaKnown RBP6.29□□□□□ -1.4
SNX13-208ENST00000482558 TXNDC17Q9BRA2 123 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 NIPSNAP3BQ9BS92 247 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 NPFFR1Q9GZQ6 430 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 UBTD1Q9HAC8 227 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 RPS10P5Q9NQ39 176 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 BIN3Q9NQY0 253 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 HIF1ANQ9NWT6 349 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 FKBP11Q9NYL4 201 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 LINC00312Q9Y6C7 94 aa6.29□□□□□ -1.4
SNX13-208ENST00000482558 URB1O60287 2271 aaKnown RBP6.29□□□□□ -1.4
SNX13-208ENST00000482558 HEATR1Q9H583 2144 aaKnown RBP6.29□□□□□ -1.4
SNX13-208ENST00000482558 IGHV3-64DA0A0J9YX35 117 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 CTXND1A0A1B0GTU2 59 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 C7orf77A4D0Y5 90 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 FNDC10F2Z333 226 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 M0R1X1 148 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 DVL1O14640 695 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 RRHO14718 337 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 NUPL2O15504 423 aaKnown RBP6.28□□□□□ -1.4
SNX13-208ENST00000482558 CYB5BO43169 146 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 TGOLN2O43493 480 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 RAMP3O60896 148 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 C1QL1O75973 258 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 FSTL3O95633 263 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 SRP19P09132 144 aaKnown RBP6.28□□□□□ -1.4
SNX13-208ENST00000482558 BCL2P10415 239 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 MAS1LP35410 378 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 FHITP49789 147 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 TMPRSS3P57727 454 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 OR2B8PP59922 312 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 POU2AF1Q16633 256 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 RTL8BQ17RB0 113 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 ACOT6Q3I5F7 207 aaPredicted RBP6.28□□□□□ -1.4
SNX13-208ENST00000482558 AWAT1Q58HT5 328 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 KCNIP4Q6PIL6 250 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 LRP11Q86VZ4 500 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 RFESDQ8TAC1 157 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 RND1Q92730 232 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 TVP23CQ96ET8 276 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 OR4C12Q96R67 309 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 NDUFAF3Q9BU61 184 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 ACTR3CQ9C0K3 210 aaPredicted RBP6.28□□□□□ -1.4
SNX13-208ENST00000482558 PARP12Q9H0J9 701 aaKnown RBP6.28□□□□□ -1.4
SNX13-208ENST00000482558 MANBALQ9NQG1 85 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 SLC39A9Q9NUM3 307 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 TMEM242Q9NWH2 141 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 IDI2-AS1Q9NZ38 188 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 DKK2Q9UBU2 259 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 TP53TG5Q9Y2B4 290 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 DMRT1Q9Y5R6 373 aa6.28□□□□□ -1.4
SNX13-208ENST00000482558 PPIAL4EA0A075B759 164 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 PPIAL4CA0A0B4J2A2 164 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 LINC00473A8K010 186 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 C1orf196B1AJZ1 125 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 C9JQL5 133 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 TMEM250H0YL14 139 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 H3BP45 60 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 NBR2O15453 112 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 IFNA17P01571 189 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 IFNA4P05014 189 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 PPIAL4FP0DN26 164 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 PPIAL4GP0DN37 164 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 DAOP14920 347 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 COMPP49747 757 aaPredicted RBP6.27□□□□□ -1.41
SNX13-208ENST00000482558 MRPS11P82912 194 aaKnown RBP6.27□□□□□ -1.41
SNX13-208ENST00000482558 RUNX1Q01196 453 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 RAB31Q13636 194 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 CBLN2Q8IUK8 224 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 UBALD1Q8TB05 177 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 TMEM18Q96B42 140 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 MALSU1Q96EH3 234 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 GAFA1Q96PS6 74 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 C20orf24Q9BUV8 137 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 IFI27L2Q9H2X8 130 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 ENY2Q9NPA8 101 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 RPRMQ9NS64 109 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 SERTAD4Q9NUC0 356 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 RPUSD1Q9UJJ7 312 aaKnown RBP6.27□□□□□ -1.41
SNX13-208ENST00000482558 PRNDQ9UKY0 176 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 ZNF257Q9Y2Q1 563 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 PPIAL4AQ9Y536 164 aa6.27□□□□□ -1.41
SNX13-208ENST00000482558 CHD3Q12873 2000 aaKnown RBP6.26□□□□□ -1.41
SNX13-208ENST00000482558 ZNF292O60281 2723 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 IGHV3-43A0A0B4J1X8 118 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 UBE2L5PA0A1B0GUS4 154 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 MAP1LC3B2A6NCE7 125 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 COLCA2A8K830 154 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 PMS2P5A8MQ11 134 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 H3BQ15 152 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 ARG1P05089 322 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 OR4A8P0C604 315 aa6.26□□□□□ -1.41
SNX13-208ENST00000482558 IGHV3-43DP0DP04 118 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms