RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 M0R233 179 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 SLC22A5O76082 557 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 RPP14O95059 124 aaKnown RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 IGKV2D-28P01615 120 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 IGHV1-46P01743 117 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 GLAP06280 429 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 MUC1P15941 1255 aaPredicted RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 RAB5AP20339 215 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 COL8A2P25067 703 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 HSD11B1P28845 292 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 CFHR2P36980 270 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 OR12D2P58182 307 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 SNRPGP62308 76 aaKnown RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 SNRPD2P62316 118 aaKnown RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 GRB2P62993 217 aaKnown RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 CCL8P80075 99 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 LCN2P80188 198 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 C5orf64Q2M2E5 130 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 RNASE13Q5GAN3 156 aaKnown RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF322Q6U7Q0 402 aaPredicted RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 PACRGLQ8N7B6 248 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 YIPF7Q8N8F6 280 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 OR10AC1Q8NH08 325 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 YIPF5Q969M3 257 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 SPTSSAQ969W0 71 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 APOBEC3DQ96AK3 386 aaPredicted RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 REEP6Q96HR9 211 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 SCGB3A2Q96PL1 93 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 SMR3AQ99954 134 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 TMEM243Q9BU79 118 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 BCL2L14Q9BZR8 327 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 YIPF3Q9GZM5 350 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 C8orf17Q9NRJ1 99 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 FAM206AQ9NX38 181 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 ZMAT5Q9UDW3 170 aaKnown RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 MRM2Q9UI43 246 aaKnown RBP3.01□□□□□ -1.93
UPF3A-207ENST00000481131 SLC22A13Q9Y226 551 aa3.01□□□□□ -1.93
UPF3A-207ENST00000481131 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.01□□□□□ -1.935e-9■■■□□ 17.5
UPF3A-207ENST00000481131 DSCAML1Q8TD84 2053 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 TLN2Q9Y4G6 2542 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 IGLV4-60A0A075B6I1 120 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 A0A096LNT2 108 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 TMEM269A0A1B0GVZ9 245 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 DAPL1A0PJW8 107 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 GGT3PA6NGU5 568 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 A6NIN4 97 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 IQCF6A8MYZ5 107 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 J3QLW9 94 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 HLA-DQA1P01909 254 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 TTRP02766 147 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 LIMS3P0CW19 117 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 LIMS4P0CW20 117 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 PMCHP20382 165 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 OPRK1P41145 380 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 RGS6P49758 472 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 ETV1P50549 477 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 EFNA4P52798 201 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 BLVRAP53004 296 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 TAS2R31P59538 309 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 FAM3AP98173 230 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 CLEC12BQ2HXU8 276 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 FAM201AQ5SY85 155 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 XAF1Q6GPH4 301 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 DRAM2Q6UX65 266 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 AHSA2Q719I0 299 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 C8orf59Q8N0T1 100 aaPredicted RBP3□□□□□ -1.93
UPF3A-207ENST00000481131 C19orf18Q8NEA5 215 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 BPIFB6Q8NFQ5 453 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 OR2Z1Q8NG97 314 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF420Q8TAQ5 688 aaPredicted RBP3□□□□□ -1.93
UPF3A-207ENST00000481131 RORBQ92753 470 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 RDH12Q96NR8 316 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 RNF5Q99942 180 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF649Q9BS31 505 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 ADAT1Q9BUB4 502 aaKnown RBP3□□□□□ -1.93
UPF3A-207ENST00000481131 PBOV1Q9GZY1 135 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 CLEC2DQ9UHP7 191 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 GNG8Q9UK08 70 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF257Q9Y2Q1 563 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 CHTOPQ9Y3Y2 248 aaKnown RBP3□□□□□ -1.93
UPF3A-207ENST00000481131 ABCA1O95477 2261 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 WNK2Q9Y3S1 2297 aa3□□□□□ -1.93
UPF3A-207ENST00000481131 IGHV1-69-2A0A0G2JMI3 117 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 A0A1B0GTI1 187 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 PNMA8CA0A1B0GUJ8 204 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 LOC107986453A0A1B0GWG9 222 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 METTL15A6NJ78 407 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 CD300LBA8K4G0 201 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 ZNF850A8MQ14 1090 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 H3BSA7 217 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 PHYHO14832 338 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 MPZL2O60487 215 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 HSBP1O75506 76 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 CYB5R3P00387 301 aaPredicted RBP2.99□□□□□ -1.93
UPF3A-207ENST00000481131 IGLV3-1P01715 115 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 TFF1P04155 84 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 HTR1AP08908 422 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 NPY1RP25929 384 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 PMELP40967 661 aa2.99□□□□□ -1.93
UPF3A-207ENST00000481131 EVX1P49640 407 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms