RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CCL28Q9NRJ3 127 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 NDUFA4L2Q9NRX3 87 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 GAR1Q9NY12 217 aaKnown RBP3.77□□□□□ -1.81
PTCD3-213ENST00000480102 COA4Q9NYJ1 87 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 THYN1Q9P016 225 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 CMYA5Q8N3K9 4069 aa3.77□□□□□ -1.81
PTCD3-213ENST00000480102 IGLV11-55A0A075B6I3 123 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 TRBV7-1A0A0A6YYK4 115 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 A0A1W2PN81 502 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 FABP12A6NFH5 140 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 MSGN1A6NI15 193 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 C15orf61A6NNL5 157 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 G3V318 75 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 CTDSP2O14595 271 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 CNIH1O95406 144 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 RAB3DO95716 219 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 CD3DP04234 171 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 AKAIN1P0CW23 69 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 SLC25A6P12236 298 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 UCP1P25874 307 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 TNFSF8P32971 234 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 CHRNA7P36544 502 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 RPL27AP46776 148 aaKnown RBP3.76□□□□□ -1.81
PTCD3-213ENST00000480102 LINC00205P59089 165 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 UBE2MP61081 183 aaKnown RBP3.76□□□□□ -1.81
PTCD3-213ENST00000480102 SRPXP78539 464 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 KLF5Q13887 457 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-213ENST00000480102 TATDN3Q17R31 274 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 NSUN5P1Q3KNT7 163 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 ACSM6Q6P461 480 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 UNQ5815/PRO19632Q6UWF5 114 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 C10orf99Q6UWK7 81 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 CCDC190Q86UF4 302 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 GPHB5Q86YW7 130 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 C11orf44Q8N8P7 122 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 OR11H1Q8NG94 326 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 OR1L8Q8NGR8 309 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 OR1P1Q8NH06 330 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 OR52I2Q8NH67 350 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 ABHD5Q8WTS1 349 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 SECTM1Q8WVN6 248 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 LSM10Q969L4 123 aaKnown RBP3.76□□□□□ -1.81
PTCD3-213ENST00000480102 MARC2Q969Z3 335 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 DIRAS2Q96HU8 199 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 SEC22AQ96IW7 307 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 TMEM56Q96MV1 263 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 TXN2Q99757 166 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 SLC25A21Q9BQT8 299 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-213ENST00000480102 C7orf50Q9BRJ6 194 aaKnown RBP3.76□□□□□ -1.81
PTCD3-213ENST00000480102 DCUN1D5Q9BTE7 237 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 COMMD5Q9GZQ3 224 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 FXYD6Q9H0Q3 95 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 KLK11Q9UBX7 282 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 SCP2D1Q9UJQ7 156 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 GPR132Q9UNW8 380 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 TMEM56-RWDD3S4R434 201 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 V9GYH0 126 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
PTCD3-213ENST00000480102 NOTCH3Q9UM47 2321 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.75□□□□□ -1.81
PTCD3-213ENST00000480102 C13orf42A0A1B0GVH6 325 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 DUXBA0A1W2PPF3 345 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 IGLC7A0M8Q6 106 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 NAP1L6A6NFF2 107 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 SH2D7A6NKC9 451 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-213ENST00000480102 A8MWP6 167 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 FAM25AB3EWG3 89 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 FAM25CB3EWG5 89 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 FAM25GB3EWG6 89 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 DISC1C4P0D8 188 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 CORTO00230 105 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 RGS5O15539 181 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 IGLV1-51P01701 117 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 HLA-AP01891 365 aaKnown RBP3.75□□□□□ -1.81
PTCD3-213ENST00000480102 TRGV3P03979 118 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 RLN1P04808 185 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 CD5P06127 495 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 SERPINE2P07093 398 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 HLA-DMAP28067 261 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 S100A5P33763 92 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 HSPE1P61604 102 aaKnown RBP3.75□□□□□ -1.81
PTCD3-213ENST00000480102 DEFA6Q01524 100 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 DHODHQ02127 395 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 ZNF45Q02386 682 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 PJVKQ0ZLH3 352 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 ECSCRQ19T08 205 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 BSXQ3C1V8 233 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 SPSB3Q6PJ21 355 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 SNX29P2Q8IUI4 249 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 LRTM2Q8N967 370 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 OR6Q1Q8NGQ2 317 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 OR51H1Q8NH63 302 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 MCFD2Q8NI22 146 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 ELOVL1Q9BW60 279 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 TMEM222Q9H0R3 208 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 GNB4Q9HAV0 340 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 ZC4H2Q9NQZ6 224 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 PEF1Q9UBV8 284 aaKnown RBP3.75□□□□□ -1.81
PTCD3-213ENST00000480102 KCNIP3Q9Y2W7 256 aa3.75□□□□□ -1.81
PTCD3-213ENST00000480102 WSB1Q9Y6I7 421 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms