RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 TRAPPC2BP0DI82 140 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 SPP1P10451 314 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 CALRP27797 417 aaKnown RBP12.42□□□□□ -0.42
HMGN1-212ENST00000479586 TAS2R31P59538 309 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 SPHARQ15513 63 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-212ENST00000479586 AIFM2Q9BRQ8 373 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 S100A14Q9HCY8 104 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 PLCXD1Q9NUJ7 323 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
HMGN1-212ENST00000479586 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 ARL6IP5O75915 188 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 APOHP02749 345 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-212ENST00000479586 POU2AF1Q16633 256 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 ZNF773Q6PK81 442 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 CSNK1G2-AS1Q8NCQ2 148 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 CCL28Q9NRJ3 127 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 TMEM14BQ9NUH8 114 aa12.41□□□□□ -0.42
HMGN1-212ENST00000479586 IGHV3-66A0A0C4DH42 116 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 TEX50A0A1B0GTY4 177 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 SULT1C2O00338 296 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 RBFOX2O43251 390 aaKnown RBP eCLIP12.4□□□□□ -0.421e-18■□□□□ 8.3
HMGN1-212ENST00000479586 NQO2P16083 231 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 RPL11P62913 178 aaKnown RBP12.4□□□□□ -0.42
HMGN1-212ENST00000479586 THOC7Q6I9Y2 204 aaKnown RBP12.4□□□□□ -0.42
HMGN1-212ENST00000479586 CNIH2Q6PI25 160 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 HSD17B13Q7Z5P4 300 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-212ENST00000479586 UFD1Q92890 307 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 HINT2Q9BX68 163 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 VSIRQ9H7M9 311 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 RABAC1Q9UI14 185 aa12.4□□□□□ -0.42
HMGN1-212ENST00000479586 TRAV2A0A0B4J234 112 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 HPRT1P00492 218 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 EIF4EP06730 217 aaKnown RBP12.39□□□□□ -0.43
HMGN1-212ENST00000479586 FGF2P09038 288 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 DHRSXQ8N5I4 330 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 NUDCD2Q8WVJ2 157 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 SECTM1Q8WVN6 248 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
HMGN1-212ENST00000479586 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
HMGN1-212ENST00000479586 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
HMGN1-212ENST00000479586 CD5P06127 495 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 RAB6AP20340 208 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 NPY1RP25929 384 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 RANBP1P43487 201 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 OR10A3P58181 314 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 CDNFQ49AH0 187 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 UBE2UQ5VVX9 321 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 C8orf59Q8N0T1 100 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-212ENST00000479586 DCSTAMPQ9H295 470 aa12.38□□□□□ -0.43
HMGN1-212ENST00000479586 ERICH4A6NGS2 130 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 IGHV3-48P01763 117 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 FABP5Q01469 135 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 HACD4Q5VWC8 232 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 TOMM20LQ6UXN7 152 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 DUSP18Q8NEJ0 188 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 ANXA10Q9UJ72 324 aa12.37□□□□□ -0.43
HMGN1-212ENST00000479586 METTL21EPA6NDL7 271 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 PTHLHP12272 177 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 MFAP4P55083 255 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 MSMO1Q15800 293 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 RNF212Q495C1 297 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 C10orf67Q8IYJ2 551 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 OR13F1Q8NGS4 319 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 GINS3Q9BRX5 216 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 ATG5Q9H1Y0 275 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
HMGN1-212ENST00000479586 TMEM235A6NFC5 223 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 PTGES3LE9PB15 166 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 I3L2K1 104 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 K7EQG2 157 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 CATR1Q13166 79 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 MISP3Q96FF7 219 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 PLEKHA2Q9HB19 425 aa12.35□□□□□ -0.43
HMGN1-212ENST00000479586 SSX5O60225 188 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 FCGR2CP31995 323 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 ARL6IP1Q15041 203 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 TRAM1Q15629 374 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 STXBP6Q8NFX7 210 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 OR1P1Q8NH06 330 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 SLC5A7Q9GZV3 580 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 ZFAND3Q9H8U3 227 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 COMMD9Q9P000 198 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 OR51B2Q9Y5P1 312 aa12.34□□□□□ -0.43
HMGN1-212ENST00000479586 MARCH11A6NNE9 402 aa12.33□□□□□ -0.44
HMGN1-212ENST00000479586 MT-CO2P00403 227 aa12.33□□□□□ -0.44
HMGN1-212ENST00000479586 PSMA1P25786 263 aaKnown RBP12.33□□□□□ -0.44
HMGN1-212ENST00000479586 ZNF367Q7RTV3 350 aa12.33□□□□□ -0.44
HMGN1-212ENST00000479586 ZBTB34Q8NCN2 500 aa12.33□□□□□ -0.44
HMGN1-212ENST00000479586 GRAMD2BQ96HH9 432 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms