RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 AADACL3Q5VUY0 350 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 DERL1Q9BUN8 251 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 PKIGQ9Y2B9 76 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 ROS1P08922 2347 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 MAP3K5Q99683 1374 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 ALPK2Q86TB3 2170 aa1.3□□□□□ -2.2
CCDC58-204ENST00000479414 IGKV3-7A0A075B6H7 116 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 IGKV2-40A0A087WW87 121 aaPredicted RBP1.29□□□□□ -2.2
CCDC58-204ENST00000479414 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.29□□□□□ -2.2
CCDC58-204ENST00000479414 SDCBPO00560 298 aaPredicted RBP1.29□□□□□ -2.2
CCDC58-204ENST00000479414 DCTN3O75935 186 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 IFNA5P01569 189 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 IGKV2D-40P01614 121 aaPredicted RBP1.29□□□□□ -2.2
CCDC58-204ENST00000479414 ZNF846Q147U1 533 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 IBA57Q5T440 356 aaKnown RBP1.29□□□□□ -2.2
CCDC58-204ENST00000479414 HIST2H3PS2Q5TEC6 136 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 LPCAT4Q643R3 524 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 C1orf158Q8N1D5 194 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 PPP1R2P1Q96PQ5 205 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 REG4Q9BYZ8 158 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 GUCA1BQ9UMX6 200 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 TTC21AQ8NDW8 1320 aa1.29□□□□□ -2.2
CCDC58-204ENST00000479414 NCOA6Q14686 2063 aaPredicted RBP1.28□□□□□ -2.2
CCDC58-204ENST00000479414 OR5G3P0C626 314 aa1.28□□□□□ -2.2
CCDC58-204ENST00000479414 HIST1H1EP10412 219 aaKnown RBP1.28□□□□□ -2.2
CCDC58-204ENST00000479414 NKX2-5P52952 324 aaPredicted RBP1.28□□□□□ -2.2
CCDC58-204ENST00000479414 DEFA1P59665 94 aa1.28□□□□□ -2.2
CCDC58-204ENST00000479414 OR2F1Q13607 317 aa1.28□□□□□ -2.2
CCDC58-204ENST00000479414 LCN15Q6UWW0 184 aa1.28□□□□□ -2.2
CCDC58-204ENST00000479414 OTUD6BQ8N6M0 293 aa1.28□□□□□ -2.2
CCDC58-204ENST00000479414 DOCK5Q9H7D0 1870 aa1.28□□□□□ -2.2
CCDC58-204ENST00000479414 TNNC2P02585 160 aa1.27□□□□□ -2.21
CCDC58-204ENST00000479414 RNASE3P12724 160 aaKnown RBP1.27□□□□□ -2.21
CCDC58-204ENST00000479414 G6PCP35575 357 aa1.27□□□□□ -2.21
CCDC58-204ENST00000479414 Q6ZS49 121 aa1.27□□□□□ -2.21
CCDC58-204ENST00000479414 LSM5Q9Y4Y9 91 aaKnown RBP1.27□□□□□ -2.21
CCDC58-204ENST00000479414 HECW1Q76N89 1606 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 CACNA1BQ00975 2339 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 HCRTO43612 131 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 C10orf55Q5SWW7 151 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 DCXRQ7Z4W1 244 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 BPIFA4PQ86YQ2 179 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 YIPF3Q9GZM5 350 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 MED9Q9NWA0 146 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 EXPH5Q8NEV8 1989 aa1.26□□□□□ -2.21
CCDC58-204ENST00000479414 HECW2Q9P2P5 1572 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 WRNQ14191 1432 aaPredicted RBP eCLIP1.25□□□□□ -2.21
CCDC58-204ENST00000479414 IGKV1D-42A0A075B6H8 117 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 FAAHO00519 579 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 CRYGAP11844 174 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 NFYAP23511 347 aaPredicted RBP1.25□□□□□ -2.21
CCDC58-204ENST00000479414 RPS20P60866 119 aaKnown RBP1.25□□□□□ -2.21
CCDC58-204ENST00000479414 SPCS3P61009 180 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 KCNJ8Q15842 424 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 NDUFA5Q16718 116 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 RPS19BP1Q86WX3 136 aaKnown RBP1.25□□□□□ -2.21
CCDC58-204ENST00000479414 PFN4Q8NHR9 129 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 MRPL30Q8TCC3 161 aaKnown RBP1.25□□□□□ -2.21
CCDC58-204ENST00000479414 RASSF5Q8WWW0 418 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 C11orf40Q8WZ69 217 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 TMEM106AQ96A25 262 aa1.25□□□□□ -2.21
CCDC58-204ENST00000479414 MRPS26Q9BYN8 205 aaKnown RBP1.25□□□□□ -2.21
CCDC58-204ENST00000479414 A0A1B0GV50 99 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 METTL15P1P0C7V9 234 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H2BOP23527 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 FKBP2P26885 142 aaKnown RBP1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H2BBP33778 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H2BDP58876 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H2BCP62807 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HBA1P69905 142 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST2H2BEQ16778 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.24□□□□□ -2.21
CCDC58-204ENST00000479414 Q6ZQT0 140 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H2BHQ93079 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H2BNQ99877 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H2BMQ99879 126 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 C11orf68Q9H3H3 251 aaKnown RBP1.24□□□□□ -2.21
CCDC58-204ENST00000479414 FBXL12Q9NXK8 326 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 KIF13BQ9NQT8 1826 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 SNAPC4Q5SXM2 1469 aa1.24□□□□□ -2.21
CCDC58-204ENST00000479414 COL4A5P29400 1685 aa1.23□□□□□ -2.21
CCDC58-204ENST00000479414 ANAPC1Q9H1A4 1944 aa1.23□□□□□ -2.21
CCDC58-204ENST00000479414 AHSA1O95433 338 aa1.23□□□□□ -2.21
CCDC58-204ENST00000479414 HLA-DRB1P01911 266 aa1.23□□□□□ -2.21
CCDC58-204ENST00000479414 CTSDP07339 412 aaPredicted RBP1.23□□□□□ -2.21
CCDC58-204ENST00000479414 HIST1H1TP22492 207 aaPredicted RBP1.23□□□□□ -2.21
CCDC58-204ENST00000479414 MAGOHP61326 146 aaKnown RBP1.23□□□□□ -2.21
CCDC58-204ENST00000479414 HIST3H3Q16695 136 aa1.23□□□□□ -2.21
CCDC58-204ENST00000479414 ZNF565Q8N9K5 539 aa1.23□□□□□ -2.21
CCDC58-204ENST00000479414 WFDC11Q8NEX6 87 aa1.23□□□□□ -2.21
CCDC58-204ENST00000479414 ADCY9O60503 1353 aa1.22□□□□□ -2.21
CCDC58-204ENST00000479414 MTUS2Q5JR59 1369 aa1.22□□□□□ -2.21
CCDC58-204ENST00000479414 CHP2O43745 196 aa1.22□□□□□ -2.21
CCDC58-204ENST00000479414 NIPSNAP2O75323 286 aa1.22□□□□□ -2.21
CCDC58-204ENST00000479414 RPL5P46777 297 aaKnown RBP1.22□□□□□ -2.21
CCDC58-204ENST00000479414 SNRPD2P62316 118 aaKnown RBP1.22□□□□□ -2.21
CCDC58-204ENST00000479414 PLCXD2Q0VAA5 305 aa1.22□□□□□ -2.21
CCDC58-204ENST00000479414 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.22□□□□□ -2.21
CCDC58-204ENST00000479414 CLVS1Q8IUQ0 354 aaPredicted RBP1.22□□□□□ -2.21
CCDC58-204ENST00000479414 NOSIPQ9Y314 301 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms