RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C1orf174Q8IYL3 243 aa8.82□□□□□ -1
VPS52-217ENST00000478934 FAM57AQ8TBR7 257 aa8.82□□□□□ -1
VPS52-217ENST00000478934 SPTA1P02549 2419 aa8.82□□□□□ -1
VPS52-217ENST00000478934 FAM90A9PA6NNJ1 464 aa8.81□□□□□ -1
VPS52-217ENST00000478934 F2Z2F3 143 aa8.81□□□□□ -1
VPS52-217ENST00000478934 DVL1O14640 695 aa8.81□□□□□ -1
VPS52-217ENST00000478934 SCGB1D1O95968 90 aa8.81□□□□□ -1
VPS52-217ENST00000478934 CXorf1O96002 111 aa8.81□□□□□ -1
VPS52-217ENST00000478934 THBDP07204 575 aa8.81□□□□□ -1
VPS52-217ENST00000478934 GCHFRP30047 84 aa8.81□□□□□ -1
VPS52-217ENST00000478934 TMPRSS3P57727 454 aa8.81□□□□□ -1
VPS52-217ENST00000478934 SELENOVP59797 346 aa8.81□□□□□ -1
VPS52-217ENST00000478934 ADIPOQQ15848 244 aa8.81□□□□□ -1
VPS52-217ENST00000478934 USF2Q15853 346 aaPredicted RBP8.81□□□□□ -1
VPS52-217ENST00000478934 TEPPQ6URK8 271 aa8.81□□□□□ -1
VPS52-217ENST00000478934 CCL17Q92583 94 aa8.81□□□□□ -1
VPS52-217ENST00000478934 SFXN3Q9BWM7 321 aa8.81□□□□□ -1
VPS52-217ENST00000478934 MRPL20Q9BYC9 149 aaKnown RBP8.81□□□□□ -1
VPS52-217ENST00000478934 SLC35D1Q9NTN3 355 aa8.81□□□□□ -1
VPS52-217ENST00000478934 ELOVL5Q9NYP7 299 aa8.81□□□□□ -1
VPS52-217ENST00000478934 FOXA2Q9Y261 457 aaPredicted RBP8.81□□□□□ -1
VPS52-217ENST00000478934 TEX50A0A1B0GTY4 177 aa8.81□□□□□ -1
VPS52-217ENST00000478934 SSBP2P81877 361 aaPredicted RBP8.81□□□□□ -1
VPS52-217ENST00000478934 C10orf55Q5SWW7 151 aa8.81□□□□□ -1
VPS52-217ENST00000478934 REC114Q7Z4M0 266 aa8.81□□□□□ -1
VPS52-217ENST00000478934 TMEM144Q7Z5S9 345 aa8.81□□□□□ -1
VPS52-217ENST00000478934 OR5R1Q8NH85 324 aa8.81□□□□□ -1
VPS52-217ENST00000478934 OR9G1Q8NH87 305 aa8.81□□□□□ -1
VPS52-217ENST00000478934 ENY2Q9NPA8 101 aa8.81□□□□□ -1
VPS52-217ENST00000478934 RPUSD1Q9UJJ7 312 aaKnown RBP8.81□□□□□ -1
VPS52-217ENST00000478934 LINC00869P0C866 280 aa8.8□□□□□ -1
VPS52-217ENST00000478934 SAA1P0DJI8 122 aaPredicted RBP8.8□□□□□ -1
VPS52-217ENST00000478934 CHRNB4P30926 498 aa8.8□□□□□ -1
VPS52-217ENST00000478934 FXYD3Q14802 87 aa8.8□□□□□ -1
VPS52-217ENST00000478934 PRR31Q5SQ13 230 aa8.8□□□□□ -1
VPS52-217ENST00000478934 TEX38Q6PEX7 206 aa8.8□□□□□ -1
VPS52-217ENST00000478934 IGF2-ASQ6U949 168 aa8.8□□□□□ -1
VPS52-217ENST00000478934 SLC25A48Q6ZT89 311 aaKnown RBP8.8□□□□□ -1
VPS52-217ENST00000478934 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
VPS52-217ENST00000478934 H1FXQ92522 213 aaKnown RBP8.8□□□□□ -1
VPS52-217ENST00000478934 RAB1CQ92928 201 aa8.8□□□□□ -1
VPS52-217ENST00000478934 TP53TG5Q9Y2B4 290 aa8.8□□□□□ -1
VPS52-217ENST00000478934 TRGV8A0A0C4DH27 118 aa8.8□□□□□ -1
VPS52-217ENST00000478934 A8MWP6 167 aa8.8□□□□□ -1
VPS52-217ENST00000478934 ZNF90Q03938 601 aa8.8□□□□□ -1
VPS52-217ENST00000478934 PSG5Q15238 335 aa8.8□□□□□ -1
VPS52-217ENST00000478934 TMEM200BQ69YZ2 307 aa8.8□□□□□ -1
VPS52-217ENST00000478934 GBGT1Q8N5D6 347 aa8.8□□□□□ -1
VPS52-217ENST00000478934 NHLRC2Q8NBF2 726 aa8.8□□□□□ -1
VPS52-217ENST00000478934 PRSS33Q8NF86 280 aa8.8□□□□□ -1
VPS52-217ENST00000478934 OR2T6Q8NHC8 308 aa8.8□□□□□ -1
VPS52-217ENST00000478934 TMEM18Q96B42 140 aa8.8□□□□□ -1
VPS52-217ENST00000478934 ACY3Q96HD9 319 aa8.8□□□□□ -1
VPS52-217ENST00000478934 RITA1Q96K30 269 aa8.8□□□□□ -1
VPS52-217ENST00000478934 SLC25A10Q9UBX3 287 aaPredicted RBP8.8□□□□□ -1
VPS52-217ENST00000478934 UPK2O00526 184 aa8.79□□□□□ -1
VPS52-217ENST00000478934 MPDU1O75352 247 aa8.79□□□□□ -1
VPS52-217ENST00000478934 TYMSP04818 313 aa8.79□□□□□ -1
VPS52-217ENST00000478934 IRF2P14316 349 aa8.79□□□□□ -1
VPS52-217ENST00000478934 CRYBB3P26998 211 aa8.79□□□□□ -1
VPS52-217ENST00000478934 KIR2DS2P43631 304 aa8.79□□□□□ -1
VPS52-217ENST00000478934 PDLIM4P50479 330 aa8.79□□□□□ -1
VPS52-217ENST00000478934 TCL1AP56279 114 aa8.79□□□□□ -1
VPS52-217ENST00000478934 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
VPS52-217ENST00000478934 MORN5Q5VZ52 161 aa8.79□□□□□ -1
VPS52-217ENST00000478934 OR10G8Q8NGN5 311 aa8.79□□□□□ -1
VPS52-217ENST00000478934 RNASEH2CQ8TDP1 164 aaKnown RBP8.79□□□□□ -1
VPS52-217ENST00000478934 ATG101Q9BSB4 218 aa8.79□□□□□ -1
VPS52-217ENST00000478934 RNASE7Q9H1E1 156 aaKnown RBP8.79□□□□□ -1
VPS52-217ENST00000478934 PLEKHA3Q9HB20 300 aa8.79□□□□□ -1
VPS52-217ENST00000478934 C16orf97H3BN30 126 aa8.79□□□□□ -1
VPS52-217ENST00000478934 CRYABP02511 175 aaKnown RBP8.79□□□□□ -1
VPS52-217ENST00000478934 TNFSF4P23510 183 aa8.79□□□□□ -1
VPS52-217ENST00000478934 LGALS4P56470 323 aa8.79□□□□□ -1
VPS52-217ENST00000478934 TDRG1Q3Y452 100 aa8.79□□□□□ -1
VPS52-217ENST00000478934 KRTCAP3Q53RY4 240 aa8.79□□□□□ -1
VPS52-217ENST00000478934 ZNF503Q96F45 646 aa8.79□□□□□ -1
VPS52-217ENST00000478934 CBLN4Q9NTU7 201 aa8.79□□□□□ -1
VPS52-217ENST00000478934 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
VPS52-217ENST00000478934 C17orf100A8MU93 164 aa8.78□□□□□ -1
VPS52-217ENST00000478934 EREGO14944 169 aa8.78□□□□□ -1
VPS52-217ENST00000478934 OR7C2O60412 319 aa8.78□□□□□ -1
VPS52-217ENST00000478934 APELAP0DMC3 54 aa8.78□□□□□ -1
VPS52-217ENST00000478934 OR10J1P30954 320 aa8.78□□□□□ -1
VPS52-217ENST00000478934 IER3P46695 156 aa8.78□□□□□ -1
VPS52-217ENST00000478934 PRR20EP86478 221 aa8.78□□□□□ -1
VPS52-217ENST00000478934 PRR20CP86479 221 aa8.78□□□□□ -1
VPS52-217ENST00000478934 PRR20DP86480 221 aa8.78□□□□□ -1
VPS52-217ENST00000478934 PRR20BP86481 221 aa8.78□□□□□ -1
VPS52-217ENST00000478934 PRR20AP86496 221 aa8.78□□□□□ -1
VPS52-217ENST00000478934 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
VPS52-217ENST00000478934 TMEM108Q6UXF1 575 aa8.78□□□□□ -1
VPS52-217ENST00000478934 C19orf35Q6ZS72 473 aa8.78□□□□□ -1
VPS52-217ENST00000478934 Q8NA96 180 aa8.78□□□□□ -1
VPS52-217ENST00000478934 TP53TG3Q9ULZ0 132 aa8.78□□□□□ -1
VPS52-217ENST00000478934 ATRXP46100 2492 aa8.78□□□□□ -1
VPS52-217ENST00000478934 IGF2RP11717 2491 aa8.78□□□□□ -1
VPS52-217ENST00000478934 IGHV3-72A0A0B4J1Y9 119 aa8.78□□□□□ -1
VPS52-217ENST00000478934 ERVFC1-1P60608 527 aa8.78□□□□□ -1
VPS52-217ENST00000478934 RHOBP62745 196 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms