RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 RABL2BQ9UNT1 228 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 SLC35A3Q9Y2D2 325 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 ECM29Q5VYK3 1845 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 KNTC1P50748 2209 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 MGAMO43451 1857 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 PLXNA4Q9HCM2 1894 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 BDP1A6H8Y1 2624 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 MYLKQ15746 1914 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 TRAV12-1A0A0B4J245 112 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 A0A0D9SG42 100 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 LINC00854A0A1B0GVQ3 168 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 A0A1B0GW15 77 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 TLCD2A6NGC4 264 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 K7EIL1 84 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 SGCEO43556 437 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 NUPR1O60356 82 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 IFNA10P01566 189 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 PRM2P04554 102 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 ATP5G1P05496 136 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 CTSDP07339 412 aaPredicted RBP-0.12□□□□□ -2.43
HPS3-205ENST00000478525 GP1BAP07359 652 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 KRT7P08729 469 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 KCNJ3P48549 501 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 CDK9P50750 372 aaKnown RBP-0.12□□□□□ -2.43
HPS3-205ENST00000478525 TNNC1P63316 161 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 CCL20P78556 96 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 RHEBQ15382 184 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 LRRC26Q2I0M4 334 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 C1orf137Q5JT78 98 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 SYPL2Q5VXT5 272 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 TEX261Q6UWH6 196 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 HIST2H3AQ71DI3 136 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 CRLF3Q8IUI8 442 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 IQCF2Q8IXL9 164 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 C10orf67Q8IYJ2 551 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 CLECL1Q8IZS7 167 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 SYCE1Q8N0S2 351 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 CDRT4Q8N9R6 151 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 HAVCR2Q8TDQ0 301 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 PSMF1Q92530 271 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 TOP1MTQ969P6 601 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 FAM210AQ96ND0 272 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 SERPINB11Q96P15 392 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 CYTH2Q99418 400 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 DHRS9Q9BPW9 319 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 TMEM147Q9BVK8 224 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 TIPINQ9BVW5 301 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 MROQ9BYG7 248 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 SLC22A4Q9H015 551 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 ASCL3Q9NQ33 180 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 NXT1Q9UKK6 140 aaKnown RBP-0.12□□□□□ -2.43
HPS3-205ENST00000478525 U3KQ87 197 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 DOCK5Q9H7D0 1870 aa-0.12□□□□□ -2.43
HPS3-205ENST00000478525 MYO3BQ8WXR4 1341 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 TNS3Q68CZ2 1445 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 ATG2AQ2TAZ0 1938 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 KIF24Q5T7B8 1368 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 PIK3R4Q99570 1358 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 C7orf71A4D174 169 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 CCDC160A6NGH7 325 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 OR4C45A6NMZ5 311 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 F8VZ95 297 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 I3L521 148 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 SSNA1O43805 119 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 TNFAIP8O95379 198 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 NSA2O95478 260 aaKnown RBP-0.13□□□□□ -2.43
HPS3-205ENST00000478525 IL6P05231 212 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 IL3P08700 152 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 KRTAP2-3P0C7H8 128 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 SFTPCP11686 197 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 UCHL3P15374 230 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 MYL12AP19105 171 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 HLA-DMBP28068 263 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 ANP32AP39687 249 aaKnown RBP-0.13□□□□□ -2.43
HPS3-205ENST00000478525 CDC34P49427 236 aaPredicted RBP-0.13□□□□□ -2.43
HPS3-205ENST00000478525 KHDC3LQ587J8 217 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 Q5BKY6 102 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 MESTQ5EB52 335 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 CDKL4Q5MAI5 379 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 C6orf52Q5T4I8 152 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 HAGHLQ6PII5 290 aaPredicted RBP-0.13□□□□□ -2.43
HPS3-205ENST00000478525 TRAPPC6BQ86SZ2 158 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 BLIDQ8IZY5 108 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 Q8N402 240 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 UBL4BQ8N7F7 174 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 C3orf56Q8N813 242 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 CANT1Q8WVQ1 401 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 ZC2HC1AQ96GY0 325 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 KRTAP2-4Q9BYR9 128 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 KRTAP2-1Q9BYU5 128 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 C14orf132Q9NPU4 83 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 TUBG2Q9NRH3 451 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 C14orf105Q9NVL8 296 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 C1orf109Q9NX04 203 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 IL36BQ9NZH7 164 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 ORMDL1Q9P0S3 153 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 CLEC2DQ9UHP7 191 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 FUT9Q9Y231 359 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 BCORL1Q5H9F3 1711 aa-0.13□□□□□ -2.43
HPS3-205ENST00000478525 KIF27Q86VH2 1401 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms