RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TXNDC17Q9BRA2 123 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 DCTN5Q9BTE1 182 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 SFXN3Q9BWM7 321 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 QTRT1Q9BXR0 403 aaKnown RBP4.06□□□□□ -1.76
SF3B6-202ENST00000478050 FAM234AQ9H0X4 552 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 IFI27L2Q9H2X8 130 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 SLC25A22Q9H936 323 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 HEYLQ9NQ87 328 aaPredicted RBP4.06□□□□□ -1.76
SF3B6-202ENST00000478050 CALYQ9NYX4 217 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 RNF7Q9UBF6 113 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 DMRT1Q9Y5R6 373 aa4.06□□□□□ -1.76
SF3B6-202ENST00000478050 SPENQ96T58 3664 aaKnown RBP4.06□□□□□ -1.76
SF3B6-202ENST00000478050 STAB1Q9NY15 2570 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 IGHV3OR15-7A0A075B7D8 119 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 TRGV10A0A0A0MS01 117 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF729A6NN14 1252 aaPredicted RBP4.05□□□□□ -1.76
SF3B6-202ENST00000478050 C15orf61A6NNL5 157 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 FNDC10F2Z333 226 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 F6UZH7 168 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 H7BYZ3 331 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 PDE6DO43924 150 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BKO60814 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 VENTXO95231 258 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 IFNA10P01566 189 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BJP06899 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 FABP1P07148 127 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 CD55P08174 381 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 CGB3P0DN86 165 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 CGB7P0DN87 165 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BOP23527 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 CD1BP29016 333 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 S100A2P29034 98 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BBP33778 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 OPRK1P41145 380 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 VDAC2P45880 294 aaPredicted RBP4.05□□□□□ -1.76
SF3B6-202ENST00000478050 NDUFA6P56556 154 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 EDDM3BP56851 147 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 LOXL3P58215 753 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BDP58876 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BCP62807 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 RPL23P62829 140 aaKnown RBP4.05□□□□□ -1.76
SF3B6-202ENST00000478050 ADIRFQ15847 76 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 POU2AF1Q16633 256 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST2H2BEQ16778 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 LTC4SQ16873 150 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 KRTCAP3Q53RY4 240 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.05□□□□□ -1.76
SF3B6-202ENST00000478050 NCMAPQ5T1S8 102 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 STUMQ69YW2 141 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF474Q6S9Z5 364 aaPredicted RBP4.05□□□□□ -1.76
SF3B6-202ENST00000478050 SPNS3Q6ZMD2 512 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 C16orf82Q7Z2V1 217 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 LRP11Q86VZ4 500 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 TGIF2LYQ8IUE0 185 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 OR4F5Q8NH21 305 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 ITLN1Q8WWA0 313 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 DDB2Q92466 427 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BHQ93079 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 SDSLQ96GA7 329 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 AJUBAQ96IF1 538 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 BTF3L4Q96K17 158 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 OR5B12Q96R08 314 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 OR4F4Q96R69 305 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BNQ99877 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 HIST1H2BMQ99879 126 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 PYGO2Q9BRQ0 406 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 PARLQ9H300 379 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 OR51M1Q9H341 326 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 SRD5A3Q9H8P0 318 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 ENY2Q9NPA8 101 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 NIT2Q9NQR4 276 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 JKAMPQ9P055 326 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 DOK5Q9P104 306 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 IL19Q9UHD0 177 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 TCF19Q9Y242 345 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 FAM215AQ9Y5M1 114 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 URGCP-MRPS24S4R325 110 aa4.05□□□□□ -1.76
SF3B6-202ENST00000478050 A0A087WWL8 130 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 KBTBD11-OT1A0A1B0GTJ5 212 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 A0A1W2PPV4 95 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 NKX6-3A6NJ46 265 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 PRSS47A8MTI9 375 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 C11orf94C9JXX5 98 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 PRSS46E5RG02 174 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 PPP1R2P9O14990 202 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 SPRY3O43610 288 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 PAGE4O60829 102 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 PROP1O75360 226 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 YIF1AO95070 293 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 HRASP01112 189 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 GYPAP02724 150 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 TRGC2P03986 189 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 PFN1P07737 140 aaKnown RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 TRGC1P0CF51 173 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 CD99P14209 185 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 IRF2P14316 349 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 CEACAM8P31997 349 aaPredicted RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 SRP14P37108 136 aaKnown RBP4.04□□□□□ -1.76
SF3B6-202ENST00000478050 GALR1P47211 349 aa4.04□□□□□ -1.76
SF3B6-202ENST00000478050 ATP5IP56385 69 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms