RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PPP1R27Q86WC6 154 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 NPBQ8NG41 125 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 C22orf15Q8WYQ4 148 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 MALSU1Q96EH3 234 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 RNF2Q99496 336 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 CCL19Q99731 98 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 MAP1LC3BQ9GZQ8 125 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 ZNF430Q9H8G1 570 aaPredicted RBP6.4□□□□□ -1.38
VMA21-203ENST00000477649 ZNRD1Q9P1U0 126 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 VAX2Q9UIW0 290 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 SIGLEC9Q9Y336 463 aa6.4□□□□□ -1.38
VMA21-203ENST00000477649 LOC102723971A0A1B0GUV8 181 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 A0A1W2PPI3 338 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 SLC25A17O43808 307 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 LY6HO94772 140 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 MOSP00540 346 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 FBP1P09467 338 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 ADCYAP1P18509 176 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 CDC34P49427 236 aaPredicted RBP6.39□□□□□ -1.39
VMA21-203ENST00000477649 ELLP55199 621 aaPredicted RBP6.39□□□□□ -1.39
VMA21-203ENST00000477649 LMO4P61968 165 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 SELENOTP62341 195 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 RHOBP62745 196 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 SRSF3P84103 164 aaKnown RBP6.39□□□□□ -1.39
VMA21-203ENST00000477649 AKR1C1Q04828 323 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 EBI3Q14213 229 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 HNF4GQ14541 408 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 PSG5Q15238 335 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 RHEBQ15382 184 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 FAM74A3Q4VXF1 159 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 CLEC2AQ6UVW9 174 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 ZNF843Q8N446 348 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 RPP25LQ8N5L8 163 aaKnown RBP6.39□□□□□ -1.39
VMA21-203ENST00000477649 OR2T10Q8NGZ9 312 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 OR1P1Q8NH06 330 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 TMEM170AQ8WVE7 144 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 TMEM190Q8WZ59 177 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 GGTLC1Q9BX51 225 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 SIRPDQ9H106 197 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 TUBA4BQ9H853 241 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 C1RLQ9NZP8 487 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 PRELID1Q9Y255 219 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 FAM96BQ9Y3D0 163 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 PXMP4Q9Y6I8 212 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 ARL2-SNX15V9GYD0 113 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 COL12A1Q99715 3063 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 PKDREJQ9NTG1 2253 aa6.39□□□□□ -1.39
VMA21-203ENST00000477649 DIDO1Q9BTC0 2240 aaKnown RBP6.38□□□□□ -1.39
VMA21-203ENST00000477649 COL6A6A6NMZ7 2263 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 ROS1P08922 2347 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 B4DEV8 164 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 TMEM250H0YL14 139 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 TIMM23O14925 209 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 NBR2O15453 112 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 TOX4O94842 621 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 NDUFA3O95167 84 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 VENTXO95231 258 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 CXorf1O96002 111 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 COX6B1P14854 86 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 PAX6P26367 422 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 BRS3P32247 399 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 TAS2R45P59539 299 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 B2MP61769 119 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 PNRC1Q12796 327 aaPredicted RBP6.38□□□□□ -1.39
VMA21-203ENST00000477649 DIAPH2-AS1Q14236 149 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 ICAM4Q14773 271 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 ZNF726P1Q15940 193 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 ARSJQ5FYB0 599 aaPredicted RBP6.38□□□□□ -1.39
VMA21-203ENST00000477649 HCP5Q6MZN7 132 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 ACSM6Q6P461 480 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 LCN15Q6UWW0 184 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 SLC16A13Q7RTY0 426 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 VMO1Q7Z5L0 202 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 SLC35E3Q7Z769 313 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 FAM168AQ92567 244 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 RAB24Q969Q5 203 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 MGST2Q99735 147 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 BPESC1Q9GZL8 116 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 TMEM231Q9H6L2 316 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 GNG13Q9P2W3 67 aa6.38□□□□□ -1.39
VMA21-203ENST00000477649 METTL1Q9UBP6 276 aaKnown RBP6.38□□□□□ -1.39
VMA21-203ENST00000477649 VWC2LB2RUY7 222 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 IGHV4-39P01824 125 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 FABP1P07148 127 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 SRP19P09132 144 aaKnown RBP6.37□□□□□ -1.39
VMA21-203ENST00000477649 FAM106CPP0CH98 169 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 OR13C7P0DN81 318 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 GATA3P23771 443 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 CCL20P78556 96 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 BTN1A1Q13410 526 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 PLGLAQ15195 96 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 TNXAQ16473 311 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 FAM122CQ6P4D5 195 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 THAP8Q8NA92 274 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 C10orf105Q8TEF2 133 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 GATAD1Q8WUU5 269 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 CFHR4Q92496 578 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 NIPSNAP3BQ9BS92 247 aa6.37□□□□□ -1.39
VMA21-203ENST00000477649 MRPL32Q9BYC8 188 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms