RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 SPATA31B1PQ5VZV4 182 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 MOB3BQ86TA1 216 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 C1QL4Q86Z23 238 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR1L8Q8NGR8 309 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 SSX3Q99909 188 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 CTDSP1Q9GZU7 261 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 TMEM133Q9H2Q1 129 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 NDUFA4L2Q9NRX3 87 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 TMEM242Q9NWH2 141 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 CXorf1O96002 111 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGLV2-23P01705 113 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 USF1P22415 310 aaPredicted RBP8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 IL3RAP26951 378 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 RND2P52198 227 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 ATP5IP56385 69 aaPredicted RBP8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 RHOBP62745 196 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 BSXQ3C1V8 233 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 SPNS3Q6ZMD2 512 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR4A5Q8NH83 315 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 TMEM167AQ8TBQ9 72 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 PCGF1Q9BSM1 259 aa8.93□□□□□ -0.98
HLA-DMB-260ENST00000477537 ENSAO43768 121 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PDE6DO43924 150 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGHV2-70P01814 119 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 NPPCP23582 126 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PPOXP50336 477 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 DLX1P56177 255 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 ERHP84090 104 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PRR20EP86478 221 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PRR20CP86479 221 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PRR20DP86480 221 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PRR20BP86481 221 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PRR20AP86496 221 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 PRB3Q04118 309 aaPredicted RBP8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 KIAA0141Q14154 515 aaPredicted RBP8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 ZNF841Q6ZN19 808 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 C16orf82Q7Z2V1 217 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 TMEM144Q7Z5S9 345 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 VSTM2AQ8TAG5 236 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 SLC45A2Q9UMX9 530 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 ABCA4P78363 2273 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGHV2-26A0A0B4J1V2 119 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGHV3-72A0A0B4J1Y9 119 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 E7EUB6 86 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 LINC00869P0C866 280 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 GCHFRP30047 84 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 GNB1P62873 340 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 GAMTQ14353 236 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 MLANAQ16655 118 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 C10orf55Q5SWW7 151 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR51G1Q8NGK1 321 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 RITA1Q96K30 269 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 TMEM204Q9BSN7 226 aa8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 ZNF430Q9H8G1 570 aaPredicted RBP8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 SEPSECSQ9HD40 501 aaKnown RBP8.92□□□□□ -0.98
HLA-DMB-260ENST00000477537 MALRD1Q5VYJ5 2156 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 SPTBN1Q01082 2364 aaKnown RBP8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 A0A1W2PN81 502 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 F6UZH7 168 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 UBE2CO00762 179 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 SLC25A17O43808 307 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR10J1P30954 320 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 MC5RP33032 325 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 CHRNA7P36544 502 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 PRRX1P54821 245 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 CD69Q07108 199 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 FABP9Q0Z7S8 132 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 VMA21Q3ZAQ7 101 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 NANPQ8TBE9 248 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 FAM210BQ96KR6 192 aa8.91□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGKV1OR2-108A0A075B7D4 117 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 CGB1A6NKQ9 187 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 INS-IGF2F8WCM5 200 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 AP4M1O00189 453 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 FOXH1O75593 365 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 ACTL6BO94805 426 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 FSTL3O95633 263 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 IGHV2-5P01817 119 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 SLC16A13Q7RTY0 426 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR5T1Q8NG75 326 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 OR4P4Q8NGL7 312 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 TNFRSF14Q92956 283 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 TPSG1Q9NRR2 321 aa8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 METTL1Q9UBP6 276 aaKnown RBP8.9□□□□□ -0.98
HLA-DMB-260ENST00000477537 PPIAL4CA0A0B4J2A2 164 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 H7BYZ3 331 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 LY6HO94772 140 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 NDUFB4O95168 129 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 PPIAL4GP0DN37 164 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 GATA2P23769 480 aaPredicted RBP8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 COX7A1P24310 79 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 WT1-ASQ06250 92 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 HLA-DRB5Q30154 266 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 FAM78BQ5VT40 261 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 MIR17HGQ75NE6 70 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 NECAP1Q8NC96 275 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 OR8B3Q8NGG8 313 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 OR2T6Q8NHC8 308 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 SLC35E1Q96K37 410 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 OR8B2Q96RD0 313 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms