RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 PALMDQ9NP74 551 aa16.1■□□□□ 0.17
LIMK1-204ENST00000476792 C21orf62Q9NYP8 219 aa16.1■□□□□ 0.17
LIMK1-204ENST00000476792 C3orf84H3BNL1 204 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 RAB3DO95716 219 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 TAS2R19P59542 299 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 Q56UQ5 140 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 TMEM229BQ8NBD8 167 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 MUC7Q8TAX7 377 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 SPATA25Q9BR10 227 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 UFC1Q9Y3C8 167 aa16.09■□□□□ 0.17
LIMK1-204ENST00000476792 HUWE1Q7Z6Z7 4374 aaKnown RBP16.08■□□□□ 0.17
LIMK1-204ENST00000476792 OR11H12B2RN74 326 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 TBPP20226 339 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 RND3P61587 244 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 SPINK9Q5DT21 86 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 STEAP1BQ6NZ63 245 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 MISP3Q96FF7 219 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 ZNF486Q96H40 463 aaPredicted RBP16.08■□□□□ 0.16
LIMK1-204ENST00000476792 TP53RKQ96S44 253 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 COPZ2Q9P299 210 aa16.08■□□□□ 0.16
LIMK1-204ENST00000476792 NBEAL2Q6ZNJ1 2754 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 IGHV3OR16-8A0A075B7F1 116 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 GABARAPH6UMI1 98 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 K7EIM0 57 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 CD74P04233 296 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 SP6Q3SY56 376 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 FAAP20Q6NZ36 180 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 OR1L6Q8NGR2 347 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 OR13C8Q8NGS7 320 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 TERB2Q8NHR7 220 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 RAB2BQ8WUD1 216 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 BSCL2Q96G97 398 aaPredicted RBP16.07■□□□□ 0.16
LIMK1-204ENST00000476792 CHRDL1Q9BU40 450 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 C20orf24Q9BUV8 137 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 ZNF436Q9C0F3 470 aaPredicted RBP16.07■□□□□ 0.16
LIMK1-204ENST00000476792 SRD5A3Q9H8P0 318 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 RETNQ9HD89 108 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 CEPT1Q9Y6K0 416 aa16.07■□□□□ 0.16
LIMK1-204ENST00000476792 C3orf85A0A1B0GTC6 90 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 AKR1C2P52895 323 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 HSPE1P61604 102 aaKnown RBP16.06■□□□□ 0.16
LIMK1-204ENST00000476792 TRIM16LQ309B1 348 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 OR2C3Q8N628 320 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 OR52B4Q8NGK2 314 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 OR1P1Q8NH06 330 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 ZFAND1Q8TCF1 268 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 MARCH1Q8TCQ1 289 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 MARC2Q969Z3 335 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 DIRAS2Q96HU8 199 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 CITED4Q96RK1 184 aa16.06■□□□□ 0.16
LIMK1-204ENST00000476792 MRPL27Q9P0M9 148 aaKnown RBP16.06■□□□□ 0.16
LIMK1-204ENST00000476792 ZNF207O43670 478 aaKnown RBP16.05■□□□□ 0.16
LIMK1-204ENST00000476792 IGKV1-5P01602 117 aa16.05■□□□□ 0.16
LIMK1-204ENST00000476792 IGHV3-48P01763 117 aa16.05■□□□□ 0.16
LIMK1-204ENST00000476792 PRCDQ00LT1 54 aa16.05■□□□□ 0.16
LIMK1-204ENST00000476792 IL18Q14116 193 aa16.05■□□□□ 0.16
LIMK1-204ENST00000476792 RBPMS2Q6ZRY4 209 aaKnown RBP16.05■□□□□ 0.16
LIMK1-204ENST00000476792 SLC16A13Q7RTY0 426 aa16.05■□□□□ 0.16
LIMK1-204ENST00000476792 CCDC71LQ8N9Z2 235 aa16.05■□□□□ 0.16
LIMK1-204ENST00000476792 TMEM190Q8WZ59 177 aa16.05■□□□□ 0.16
LIMK1-204ENST00000476792 RBMY1BA6NDE4 496 aaKnown RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 RBMY1EA6NEQ0 496 aaKnown RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 F8W735 103 aaPredicted RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 RBMY1DP0C7P1 496 aaKnown RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 C8orf88P0DMB2 117 aa16.04■□□□□ 0.16
LIMK1-204ENST00000476792 LYL1P12980 280 aa16.04■□□□□ 0.16
LIMK1-204ENST00000476792 ADMP35318 185 aa16.04■□□□□ 0.16
LIMK1-204ENST00000476792 TMBIM6P55061 237 aa16.04■□□□□ 0.16
LIMK1-204ENST00000476792 ELLP55199 621 aaPredicted RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 SPSB3Q6PJ21 355 aa16.04■□□□□ 0.16
LIMK1-204ENST00000476792 DYNC2LI1Q8TCX1 351 aa16.04■□□□□ 0.16
LIMK1-204ENST00000476792 PINX1Q96BK5 328 aaKnown RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 C6orf62Q9GZU0 229 aaPredicted RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 CCDC59Q9P031 241 aaKnown RBP16.04■□□□□ 0.16
LIMK1-204ENST00000476792 NOL3O60936 208 aaKnown RBP16.03■□□□□ 0.16
LIMK1-204ENST00000476792 MRPS10P82664 201 aaKnown RBP16.03■□□□□ 0.16
LIMK1-204ENST00000476792 ERHP84090 104 aaKnown RBP16.03■□□□□ 0.16
LIMK1-204ENST00000476792 CASC10Q5T4H9 136 aa16.03■□□□□ 0.16
LIMK1-204ENST00000476792 ZFAND6Q6FIF0 208 aa16.03■□□□□ 0.16
LIMK1-204ENST00000476792 LINC00322Q6ZN03 302 aaPredicted RBP16.03■□□□□ 0.16
LIMK1-204ENST00000476792 RNASE11Q8TAA1 199 aaKnown RBP16.03■□□□□ 0.16
LIMK1-204ENST00000476792 SMIM4Q8WVI0 70 aa16.03■□□□□ 0.16
LIMK1-204ENST00000476792 FAM110AQ9BQ89 295 aa16.03■□□□□ 0.16
LIMK1-204ENST00000476792 A0A0B4J293 547 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 DISC1C4P0D8 188 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 NDUFA4O00483 81 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 ATG12O94817 140 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 MT-CO2P00403 227 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 IFNA17P01571 189 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 CTSDP07339 412 aaPredicted RBP16.02■□□□□ 0.16
LIMK1-204ENST00000476792 MFAP4P55083 255 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 SSBP1Q04837 148 aaKnown RBP16.02■□□□□ 0.16
LIMK1-204ENST00000476792 MEF2DQ14814 521 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 SLC35G3Q8N808 338 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 ISOC1Q96CN7 298 aa16.02■□□□□ 0.16
LIMK1-204ENST00000476792 DAZ1Q9NQZ3 744 aaKnown RBP16.02■□□□□ 0.16
LIMK1-204ENST00000476792 C14orf166Q9Y224 244 aaKnown RBP16.02■□□□□ 0.16
LIMK1-204ENST00000476792 I3L2K1 104 aa16.01■□□□□ 0.15
LIMK1-204ENST00000476792 NUPL2O15504 423 aaKnown RBP16.01■□□□□ 0.15
LIMK1-204ENST00000476792 ST8SIA3O43173 380 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms