RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TFF1P04155 84 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 GDF1P27539 372 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 KIR2DS4P43632 304 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 GPR12P47775 334 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 HBG1P69891 147 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 HBG2P69892 147 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 KIR2DS1Q14954 304 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 TRIP6Q15654 476 aaKnown RBP6.94□□□□□ -1.3
VAPB-205ENST00000476395 MUC21Q5SSG8 566 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 PRR27Q6MZM9 219 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 IGHV3-64DA0A0J9YX35 117 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 OR5B21A6NL26 309 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 CER1O95813 267 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 OR10J4P0C629 311 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 MORN2Q502X0 79 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 ZNF562Q6V9R5 426 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 NPCDR1Q9BY65 106 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 RNASE7Q9H1E1 156 aaKnown RBP6.94□□□□□ -1.3
VAPB-205ENST00000476395 HSPB7Q9UBY9 170 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 TRAV8-6A0A0B4J262 113 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 PSPNO60542 156 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 ZG16O60844 167 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 MT-CO2P00403 227 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 TNFRSF1AP19438 455 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 MAGEA5P43359 124 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 CKS1BP61024 79 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 SRYQ05066 204 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 EBLN2Q6P2I7 272 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 C11orf53Q8IXP5 236 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 DRAM1Q8N682 238 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 SMPXQ9UHP9 88 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 WASHC3Q9Y3C0 194 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 TRAV30A0A087WSZ9 112 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 C9orf172C9J069 976 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 MRPL33O75394 65 aaKnown RBP6.93□□□□□ -1.3
VAPB-205ENST00000476395 ZNF324O75467 553 aaPredicted RBP6.93□□□□□ -1.3
VAPB-205ENST00000476395 OR2H2O95918 312 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 LINC00696Q6ZRV3 163 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 DOLPP1Q86YN1 238 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 TSKUQ8WUA8 353 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 TAAR6Q96RI8 345 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 KCNS2Q9ULS6 477 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 YTHDF2Q9Y5A9 579 aaKnown RBP6.93□□□□□ -1.3
VAPB-205ENST00000476395 TRAPPC2LH3BP13 241 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 M0QXV9 152 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 ARL14EPLP0DKL9 152 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 CA6P23280 308 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 CD24P25063 80 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 CA7P43166 264 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 LGALS4P56470 323 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 ARG2P78540 354 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 MMD2Q8IY49 270 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 TMEM186Q96B77 213 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 KCNS1Q96KK3 526 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 QTRT1Q9BXR0 403 aaKnown RBP6.93□□□□□ -1.3
VAPB-205ENST00000476395 DNAJC13O75165 2243 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 IGHV1-69-2A0A0G2JMI3 117 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 hDV102S1A0JD36 115 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 GAGE12BA1L429 117 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 PROP1O75360 226 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 NUDT3O95989 172 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 SP9P0CG40 484 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 G6PCP35575 357 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 MFAP4P55083 255 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 VWC2Q2TAL6 325 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 SPATA46Q5T0L3 261 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 MKXQ8IYA7 352 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 ASCL2Q99929 193 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 TTTY12Q9BZ98 90 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
VAPB-205ENST00000476395 BMPR1BO00238 502 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 DEGS1O15121 323 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 TMPRSS2O15393 492 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 SSTR5P35346 364 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 CYB561P49447 251 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 PPOXP50336 477 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 ZNF816Q0VGE8 651 aaPredicted RBP6.92□□□□□ -1.3
VAPB-205ENST00000476395 SPATA31B1PQ5VZV4 182 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 LINC00173Q6ZV60 143 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 MUC15Q8N387 334 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 FGFRL1Q8N441 504 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 SCCPDHQ8NBX0 429 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 AHCTF1Q8WYP5 2266 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 PDE6DO43924 150 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 GPR6P46095 362 aaPredicted RBP6.92□□□□□ -1.3
VAPB-205ENST00000476395 PSG9Q00887 426 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 Q0VG73 95 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 ZNF146Q15072 292 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 IL36BQ9NZH7 164 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 SS18L2Q9UHA2 77 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 CSMD1Q96PZ7 3565 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 FOXH1O75593 365 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 CD99P14209 185 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 COX5AP20674 150 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 RPL31P62899 125 aaKnown RBP6.92□□□□□ -1.3
VAPB-205ENST00000476395 TNXAQ16473 311 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 UTF1Q5T230 341 aa6.92□□□□□ -1.3
VAPB-205ENST00000476395 STUMQ69YW2 141 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms