RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 C9orf170A2RU37 121 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 H3BUA1 57 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 NDUFB8O95169 186 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 SERPINE2P07093 398 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 OR5AC1P0C628 307 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 RPA2P15927 270 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 UCP1P25874 307 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 SRPXP78539 464 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 DEFA5Q01523 94 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 TNFRSF9Q07011 255 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 PJVKQ0ZLH3 352 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 DHRS2Q13268 280 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 LYG2Q86SG7 212 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 WFDC3Q8IUB2 231 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 TP53RKQ96S44 253 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 TMEM222Q9H0R3 208 aa10.49□□□□□ -0.73
FAM3A-218ENST00000475657 GPN1Q9HCN4 374 aaPredicted RBP10.49□□□□□ -0.73
FAM3A-218ENST00000475657 C13orf42A0A1B0GVH6 325 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 C7orf66A4D0T2 115 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 ANKRD34BA5PLL1 514 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 ZNF785A8K8V0 405 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 SNRPGP15A8MWD9 76 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 FCGR3BO75015 233 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 OR2A4O95047 310 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 CD7P09564 240 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 BRWD1-AS2P59051 145 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 FXYD3Q14802 87 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 OR2B11Q5JQS5 317 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
FAM3A-218ENST00000475657 GLYATL2Q8WU03 294 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 PLEKHA2Q9HB19 425 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 COMMD9Q9P000 198 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
FAM3A-218ENST00000475657 DYNC1H1Q14204 4646 aaKnown RBP10.48□□□□□ -0.73
FAM3A-218ENST00000475657 A0A0B4J293 547 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 A0A0B4J2A0 478 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 CREBL2O60519 120 aaPredicted RBP10.47□□□□□ -0.73
FAM3A-218ENST00000475657 HPRT1P00492 218 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 APELAP0DMC3 54 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 TMEM187Q14656 261 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 ZNF585BQ52M93 769 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 TMEM177Q53S58 311 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 LRTM2Q8N967 370 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 COQ8AQ8NI60 647 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 OSR1Q8TAX0 266 aaPredicted RBP10.47□□□□□ -0.73
FAM3A-218ENST00000475657 MITD1Q8WV92 249 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 IL22RA2Q969J5 263 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 TMEM56Q96MV1 263 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 TSNAXQ99598 290 aaKnown RBP10.47□□□□□ -0.73
FAM3A-218ENST00000475657 RNF5Q99942 180 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 SEC22CQ9BRL7 303 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 PEMTQ9UBM1 199 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 SHPKQ9UHJ6 478 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 TMEM56-RWDD3S4R434 201 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 FAT2Q9NYQ8 4349 aa10.47□□□□□ -0.73
FAM3A-218ENST00000475657 A0A0J9YWU9 116 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 ATG12O94817 140 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 CDS2O95674 445 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 CRYZL1O95825 349 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 SSBP2P81877 361 aaPredicted RBP10.46□□□□□ -0.73
FAM3A-218ENST00000475657 EWSR1Q01844 656 aaKnown RBP eCLIP10.46□□□□□ -0.73
FAM3A-218ENST00000475657 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 SP6Q3SY56 376 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 CD300EQ496F6 205 aaPredicted RBP10.46□□□□□ -0.73
FAM3A-218ENST00000475657 LINC00336Q6ZUF6 198 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 LGI3Q8N145 548 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 RBPMSQ93062 196 aaKnown RBP10.46□□□□□ -0.73
FAM3A-218ENST00000475657 PHB2Q99623 299 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
FAM3A-218ENST00000475657 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
FAM3A-218ENST00000475657 DUXBA0A1W2PPF3 345 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 S1PR2O95136 353 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 HRASP01112 189 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 NQO2P16083 231 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 LPAR6P43657 344 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 LGALS7P47929 136 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 POU2AF1Q16633 256 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 ZNF343Q6P1L6 599 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 Q6ZNX1 250 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 OR52B4Q8NGK2 314 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 HARBI1Q96MB7 349 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 GGTLC1Q9BX51 225 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 TP53TG1Q9Y2A0 90 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 ALG5Q9Y673 324 aa10.45□□□□□ -0.74
FAM3A-218ENST00000475657 DNAH2Q9P225 4427 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 SHOXO15266 292 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 SPDEFO95238 335 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 IGKV1-39P01597 117 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 IGLV2-23P01705 113 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 TRBV12-3P01733 135 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 IGKV1D-39P04432 117 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 BMI1P35226 326 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 RPEL1Q2QD12 228 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 SELENOHQ8IZQ5 122 aaKnown RBP10.44□□□□□ -0.74
FAM3A-218ENST00000475657 CADM3Q8N126 398 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms