RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CNIH1O95406 144 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 IFNA10P01566 189 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 IGKV1D-33P01593 117 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 IGKV1-33P01594 117 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 IGLV2-23P01705 113 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 OR9G9P0C7N8 305 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 SAA1P0DJI8 122 aaPredicted RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 TPT1P13693 172 aaKnown RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 GPX4P36969 197 aaPredicted RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 LINC00205P59089 165 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 RAB14P61106 215 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 FOXL1Q12952 345 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 RAB31Q13636 194 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 DIAPH2-AS1Q14236 149 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 MMDQ15546 238 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 C5orf64Q2M2E5 130 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 LRRC75BQ2VPJ9 315 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 Q5BKY6 102 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 UTF1Q5T230 341 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 RBMS3Q6XE24 437 aaKnown RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 LHFPL4Q7Z7J7 247 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 STPG2Q8N412 459 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 TMEM86BQ8N661 226 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 UBAC2Q8NBM4 344 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 SCGB1C1Q8TD33 95 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 RNASEH2CQ8TDP1 164 aaKnown RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 GNPNAT1Q96EK6 184 aaPredicted RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 RBM14Q96PK6 669 aaKnown RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 PRDM13Q9H4Q3 707 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 THYN1Q9P016 225 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 TCF19Q9Y242 345 aa5.61□□□□□ -1.51
SHQ1-207ENST00000475558 RCL1Q9Y2P8 373 aaKnown RBP5.61□□□□□ -1.51
SHQ1-207ENST00000475558 TRRAPQ9Y4A5 3859 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 A0A0G2JRQ6 117 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 RPS10-NUDT3A0A1W2PQS6 291 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 RNF222A6NCQ9 220 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 G3V3Q6 166 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 SMLR1H3BR10 107 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 SLC25A17O43808 307 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 MPDU1O75352 247 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 HLA-DRB1P01911 266 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 OR8U8P0C7N1 319 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 HIST1H1BP16401 226 aaKnown RBP5.6□□□□□ -1.51
SHQ1-207ENST00000475558 ATF4P18848 351 aaPredicted RBP5.6□□□□□ -1.51
SHQ1-207ENST00000475558 VDAC2P45880 294 aaPredicted RBP5.6□□□□□ -1.51
SHQ1-207ENST00000475558 RPL27AP46776 148 aaKnown RBP5.6□□□□□ -1.51
SHQ1-207ENST00000475558 HOXA1P49639 335 aaPredicted RBP5.6□□□□□ -1.51
SHQ1-207ENST00000475558 RAB5CP51148 216 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 PAX9P55771 341 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 OR2B8PP59922 312 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 UBA52P62987 128 aaKnown RBP5.6□□□□□ -1.51
SHQ1-207ENST00000475558 CD300CQ08708 224 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 KLRD1Q13241 179 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 C2orf83Q53S99 150 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 SPANXN5Q5MJ07 72 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 LAMTOR1Q6IAA8 161 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 TMEM14EPQ6UXP3 125 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 BAP18Q8IXM2 172 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 VKORC1L1Q8N0U8 176 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 Q8N6K4 173 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 SSX3Q99909 188 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 PARD6GQ9BYG4 376 aaPredicted RBP5.6□□□□□ -1.51
SHQ1-207ENST00000475558 MAGT1Q9H0U3 335 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 C11orf1Q9H5F2 150 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 NPVFQ9HCQ7 196 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 OR5AC2Q9NZP5 309 aa5.6□□□□□ -1.51
SHQ1-207ENST00000475558 IGHV3-72A0A0B4J1Y9 119 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 TRAV40A0A0B4J280 105 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 A0A1W2PRD5 423 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 A0A1W2PRF3 423 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 A0A1W2PRM7 423 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 FAM24AA6NFZ4 105 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 SCGB2A1O75556 95 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 MBP02144 154 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 IFNA4P05014 189 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 CXCL2P19875 107 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 EWSR1Q01844 656 aaKnown RBP eCLIP5.59□□□□□ -1.51
SHQ1-207ENST00000475558 EXOSC2Q13868 293 aaKnown RBP5.59□□□□□ -1.51
SHQ1-207ENST00000475558 FXYD3Q14802 87 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 NDUFA5Q16718 116 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 FAM209BQ5JX69 171 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 SLC25A24Q6NUK1 477 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 ETV3LQ6ZN32 361 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 PDZD9Q8IXQ8 264 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 ZNF114Q8NC26 417 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 SLC24A4Q8NFF2 622 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 OR1P1Q8NH06 330 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 STOML3Q8TAV4 291 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 SSMEM1Q8WWF3 244 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 SSBP4Q9BWG4 385 aaPredicted RBP5.59□□□□□ -1.51
SHQ1-207ENST00000475558 ZNF471Q9BX82 626 aaPredicted RBP5.59□□□□□ -1.51
SHQ1-207ENST00000475558 ZNF430Q9H8G1 570 aaPredicted RBP5.59□□□□□ -1.51
SHQ1-207ENST00000475558 PLSCR3Q9NRY6 295 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 GAR1Q9NY12 217 aaKnown RBP5.59□□□□□ -1.51
SHQ1-207ENST00000475558 ZNRD1Q9P1U0 126 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 FBXO7Q9Y3I1 522 aa5.59□□□□□ -1.51
SHQ1-207ENST00000475558 NPIPB5A8MRT5 1133 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 UMAD1C9J7I0 102 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 C17orf112F2Z3M2 114 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms