RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TMEM17Q86X19 198 aa14.94□□□□□ -0.02
VPS36-203ENST00000475375 COMMD9Q9P000 198 aa14.94□□□□□ -0.02
VPS36-203ENST00000475375 NOTOA8MTQ0 251 aa14.93□□□□□ -0.02
VPS36-203ENST00000475375 CTSGP08311 255 aa14.93□□□□□ -0.02
VPS36-203ENST00000475375 AQP4P55087 323 aa14.93□□□□□ -0.02
VPS36-203ENST00000475375 ZNF818PQ6ZRF7 136 aa14.93□□□□□ -0.02
VPS36-203ENST00000475375 NDUFA4L2Q9NRX3 87 aa14.93□□□□□ -0.02
VPS36-203ENST00000475375 DAPK2Q9UIK4 370 aa14.93□□□□□ -0.02
VPS36-203ENST00000475375 OR51B2Q9Y5P1 312 aa14.93□□□□□ -0.02
VPS36-203ENST00000475375 TRAV14DV4A0A0A6YYC5 116 aa14.92□□□□□ -0.02
VPS36-203ENST00000475375 MARCH11A6NNE9 402 aa14.92□□□□□ -0.02
VPS36-203ENST00000475375 TBCEQ15813 527 aaPredicted RBP14.92□□□□□ -0.02
VPS36-203ENST00000475375 TCF24Q7RTU0 167 aa14.92□□□□□ -0.02
VPS36-203ENST00000475375 CENPSQ8N2Z9 138 aa14.92□□□□□ -0.02
VPS36-203ENST00000475375 NSG2Q9Y328 171 aa14.92□□□□□ -0.02
VPS36-203ENST00000475375 DNASE2O00115 360 aaPredicted RBP14.91□□□□□ -0.02
VPS36-203ENST00000475375 SNAPC5O75971 98 aa14.91□□□□□ -0.02
VPS36-203ENST00000475375 EIF4EP06730 217 aaKnown RBP14.91□□□□□ -0.02
VPS36-203ENST00000475375 LEMD1Q68G75 181 aa14.91□□□□□ -0.02
VPS36-203ENST00000475375 LGALS14Q8TCE9 139 aa14.91□□□□□ -0.02
VPS36-203ENST00000475375 MISP3Q96FF7 219 aa14.91□□□□□ -0.02
VPS36-203ENST00000475375 RHBDL2Q9NX52 303 aa14.91□□□□□ -0.02
VPS36-203ENST00000475375 TRAV18A0A075B6X5 111 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 C15orf61A6NNL5 157 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 MED14OSP0DP75 135 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 HLA-DMBP28068 263 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 DEFB131AP59861 70 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 HERV-K104P61576 105 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 RPL11P62913 178 aaKnown RBP14.9□□□□□ -0.02
VPS36-203ENST00000475375 HOGA1Q86XE5 327 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 TSPAN14Q8NG11 270 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 GIMAP1Q8WWP7 306 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 SLC25A46Q96AG3 418 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 DGCR14Q96DF8 476 aaKnown RBP14.9□□□□□ -0.02
VPS36-203ENST00000475375 OR10C1Q96KK4 312 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 TMEM56Q96MV1 263 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 HRH4Q9H3N8 390 aa14.9□□□□□ -0.02
VPS36-203ENST00000475375 IGHV4-4A0A075B6R2 117 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 KRASP01116 189 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 RLN1P04808 185 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 MFAP4P55083 255 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 FAM90A2PQ658T7 463 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 STHQ8IWL8 128 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 Q8NAQ8 132 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 RRP15Q9Y3B9 282 aaKnown RBP14.89□□□□□ -0.03
VPS36-203ENST00000475375 FAT2Q9NYQ8 4349 aa14.89□□□□□ -0.03
VPS36-203ENST00000475375 TRAV10A0A0B4J240 114 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 IGHV4-28A0A0C4DH34 117 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 ST8SIA3O43173 380 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 CD5P06127 495 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 G6PCP35575 357 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 LPAR6P43657 344 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 OR1P1Q8NH06 330 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 BORCS5Q969J3 196 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 GINS3Q9BRX5 216 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 MS4A6AQ9H2W1 248 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 PRNDQ9UKY0 176 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 DNAH2Q9P225 4427 aa14.88□□□□□ -0.03
VPS36-203ENST00000475375 A0A1B0GVY2 172 aa14.87□□□□□ -0.03
VPS36-203ENST00000475375 DFFBO76075 338 aa14.87□□□□□ -0.03
VPS36-203ENST00000475375 IGHV3-48P01763 117 aa14.87□□□□□ -0.03
VPS36-203ENST00000475375 RBMY1A1P0DJD3 496 aaKnown RBP14.87□□□□□ -0.03
VPS36-203ENST00000475375 RBMY1CP0DJD4 496 aa14.87□□□□□ -0.03
VPS36-203ENST00000475375 F2RP25116 425 aa14.87□□□□□ -0.03
VPS36-203ENST00000475375 RBMY1FQ15415 496 aaKnown RBP14.87□□□□□ -0.03
VPS36-203ENST00000475375 Q6ZTC4 211 aa14.87□□□□□ -0.03
VPS36-203ENST00000475375 ZNF414Q96IQ9 312 aa14.87□□□□□ -0.03
VPS36-203ENST00000475375 NXF2Q9GZY0 626 aaKnown RBP14.87□□□□□ -0.03
VPS36-203ENST00000475375 IGHV3-66A0A0C4DH42 116 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 PRSS29PA6NIE9 313 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 GNG7O60262 68 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 GNRHRP30968 328 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 SFXN4Q6P4A7 337 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 TPRA1Q86W33 373 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 OR5AP2Q8NGF4 316 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 FCAMRQ8WWV6 532 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 ST8SIA2Q92186 375 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 PINX1Q96BK5 328 aaKnown RBP14.86□□□□□ -0.03
VPS36-203ENST00000475375 TXN2Q99757 166 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 TXNL4BQ9NX01 149 aaKnown RBP14.86□□□□□ -0.03
VPS36-203ENST00000475375 FKBP11Q9NYL4 201 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 RABAC1Q9UI14 185 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 BLOC1S6Q9UL45 172 aa14.86□□□□□ -0.03
VPS36-203ENST00000475375 MIFP14174 115 aa14.85□□□□□ -0.03
VPS36-203ENST00000475375 FAM24BQ8N5W8 94 aa14.85□□□□□ -0.03
VPS36-203ENST00000475375 EHFQ9NZC4 300 aa14.85□□□□□ -0.03
VPS36-203ENST00000475375 MEIS3P1A6NDR6 274 aa14.84□□□□□ -0.03
VPS36-203ENST00000475375 I3L2K1 104 aa14.84□□□□□ -0.03
VPS36-203ENST00000475375 PGLYRP1O75594 196 aaPredicted RBP14.84□□□□□ -0.03
VPS36-203ENST00000475375 MT-CO2P00403 227 aa14.84□□□□□ -0.03
VPS36-203ENST00000475375 PVRIGQ6DKI7 326 aa14.84□□□□□ -0.03
VPS36-203ENST00000475375 RNF126Q9BV68 326 aa14.84□□□□□ -0.03
VPS36-203ENST00000475375 DBX1A6NMT0 343 aa14.83□□□□□ -0.04
VPS36-203ENST00000475375 M0R2N4 97 aa14.83□□□□□ -0.04
VPS36-203ENST00000475375 APOHP02749 345 aaPredicted RBP14.83□□□□□ -0.04
VPS36-203ENST00000475375 FGF9P31371 208 aaPredicted RBP14.83□□□□□ -0.04
VPS36-203ENST00000475375 MXD1Q05195 221 aa14.83□□□□□ -0.04
VPS36-203ENST00000475375 TOMM20LQ6UXN7 152 aa14.83□□□□□ -0.04
VPS36-203ENST00000475375 LILRB2Q8N423 598 aa14.83□□□□□ -0.04
VPS36-203ENST00000475375 DUSP18Q8NEJ0 188 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms