RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 C20orf24Q9BUV8 137 aa13.11□□□□□ -0.31
PCGF3-209ENST00000475288 SMPXQ9UHP9 88 aa13.11□□□□□ -0.31
PCGF3-209ENST00000475288 MARCH11A6NNE9 402 aa13.1□□□□□ -0.31
PCGF3-209ENST00000475288 MPTX1A8MV57 137 aa13.1□□□□□ -0.31
PCGF3-209ENST00000475288 K7EIM0 57 aa13.1□□□□□ -0.31
PCGF3-209ENST00000475288 ERVK-16P61578 105 aa13.1□□□□□ -0.31
PCGF3-209ENST00000475288 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
PCGF3-209ENST00000475288 OR5AP2Q8NGF4 316 aa13.1□□□□□ -0.31
PCGF3-209ENST00000475288 OR10C1Q96KK4 312 aa13.1□□□□□ -0.31
PCGF3-209ENST00000475288 RARRES2Q99969 163 aa13.1□□□□□ -0.31
PCGF3-209ENST00000475288 TRAV18A0A075B6X5 111 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 CTSGP08311 255 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 PTHLHP12272 177 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 F2RP25116 425 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 CBX5P45973 191 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 AADACL3Q5VUY0 350 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 OR5B3Q8NH48 314 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 OR51H1Q8NH63 302 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 C11orf45Q8TAV5 145 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 DGCR14Q96DF8 476 aaKnown RBP13.09□□□□□ -0.31
PCGF3-209ENST00000475288 SLC25A38Q96DW6 304 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
PCGF3-209ENST00000475288 IGHV7-4-1A0A0J9YVY3 117 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 CHEK1O14757 476 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 IFNA4P05014 189 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 CD5P06127 495 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 GNRHRP30968 328 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 FXYD4P59646 89 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 RBMS2Q15434 407 aaKnown RBP13.08□□□□□ -0.32
PCGF3-209ENST00000475288 CTF1Q16619 201 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 CLVS1Q8IUQ0 354 aaPredicted RBP13.08□□□□□ -0.32
PCGF3-209ENST00000475288 APRG1Q8IVJ8 170 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 RNF2Q99496 336 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 RHPN1-AS1Q9BWJ2 59 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 AUNIPQ9H7T9 357 aa13.08□□□□□ -0.32
PCGF3-209ENST00000475288 NOL3O60936 208 aaKnown RBP13.07□□□□□ -0.32
PCGF3-209ENST00000475288 Q56UQ5 140 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 FAM90A2PQ658T7 463 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 DHRS11Q6UWP2 260 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 TMEM116Q8NCL8 245 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 OR1P1Q8NH06 330 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 C2CD4CQ8TF44 421 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 TMEM56Q96MV1 263 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 TXN2Q99757 166 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 FKBP11Q9NYL4 201 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 RSL24D1Q9UHA3 163 aaKnown RBP13.07□□□□□ -0.32
PCGF3-209ENST00000475288 SSR3Q9UNL2 185 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 OR51B2Q9Y5P1 312 aa13.07□□□□□ -0.32
PCGF3-209ENST00000475288 PCLOQ9Y6V0 5065 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 NUPL2O15504 423 aaKnown RBP13.06□□□□□ -0.32
PCGF3-209ENST00000475288 ZNF207O43670 478 aaKnown RBP13.06□□□□□ -0.32
PCGF3-209ENST00000475288 TMEM127O75204 238 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 SNAPC5O75971 98 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
PCGF3-209ENST00000475288 HERV-K104P61576 105 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 TMEM17Q86X19 198 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 UBAC2Q8NBM4 344 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 OR5H6Q8NGV6 325 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 OR11H2Q8NH07 326 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 DIABLOQ9NR28 239 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 TMEM14BQ9NUH8 114 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 PRNDQ9UKY0 176 aa13.06□□□□□ -0.32
PCGF3-209ENST00000475288 IGHV3OR16-8A0A075B7F1 116 aa13.05□□□□□ -0.32
PCGF3-209ENST00000475288 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
PCGF3-209ENST00000475288 H3BMQ9 156 aa13.05□□□□□ -0.32
PCGF3-209ENST00000475288 SDC2P34741 201 aa13.05□□□□□ -0.32
PCGF3-209ENST00000475288 MOB3AQ96BX8 217 aa13.05□□□□□ -0.32
PCGF3-209ENST00000475288 CMTM3Q96MX0 182 aa13.05□□□□□ -0.32
PCGF3-209ENST00000475288 NAA50Q9GZZ1 169 aaKnown RBP13.05□□□□□ -0.32
PCGF3-209ENST00000475288 FAM212BQ9NTI7 297 aaPredicted RBP13.05□□□□□ -0.32
PCGF3-209ENST00000475288 PGLYRP1O75594 196 aaPredicted RBP13.04□□□□□ -0.32
PCGF3-209ENST00000475288 DFFBO76075 338 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 KRASP01116 189 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 RLN1P04808 185 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 MFAP4P55083 255 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 ZNF124Q15973 351 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 ZNF114Q8NC26 417 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 FCAMRQ8WWV6 532 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 TSC22D3Q99576 134 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 HINT2Q9BX68 163 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 NXF2Q9GZY0 626 aaKnown RBP13.04□□□□□ -0.32
PCGF3-209ENST00000475288 HRH4Q9H3N8 390 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 FBXL17Q9UF56 701 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 ANAPC10Q9UM13 185 aa13.04□□□□□ -0.32
PCGF3-209ENST00000475288 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 C15orf61A6NNL5 157 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 C11orf94C9JXX5 98 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 I3L2K1 104 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 LPAR6P43657 344 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 PAFAH1B2P68402 229 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 PRR20EP86478 221 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 PRR20CP86479 221 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 PRR20DP86480 221 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 PRR20BP86481 221 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 PRR20AP86496 221 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 CMTM1Q8IZ96 169 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 EHFQ9NZC4 300 aa13.03□□□□□ -0.32
PCGF3-209ENST00000475288 G6PCP35575 357 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms