RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 FCGR2CP31995 323 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 WT1-ASQ06250 92 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 PVRIGQ6DKI7 326 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 OR10C1Q96KK4 312 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 GINS3Q9BRX5 216 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 DUSP21Q9H596 190 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 IGHV4-4A0A075B6R2 117 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 IGHV3-21A0A0B4J1V1 117 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 TEX50A0A1B0GTY4 177 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 PRSS29PA6NIE9 313 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 PPYP01298 95 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 CTSGP08311 255 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 AADACL3Q5VUY0 350 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 ZNF773Q6PK81 442 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 PRSS48Q7RTY5 328 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 STHQ8IWL8 128 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 Q8NAQ8 132 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 BEST4Q8NFU0 473 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 DGCR14Q96DF8 476 aaKnown RBP9.18□□□□□ -0.94
SKA3-206ENST00000475251 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 SLC5A7Q9GZV3 580 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 NDUFA4L2Q9NRX3 87 aa9.18□□□□□ -0.94
SKA3-206ENST00000475251 TRAV2A0A0B4J234 112 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
SKA3-206ENST00000475251 K7EIM0 57 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 DNASE2O00115 360 aaPredicted RBP9.17□□□□□ -0.94
SKA3-206ENST00000475251 EBAG9O00559 213 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 P0DMU3 169 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 FAM231AP0DMU4 169 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 FAM231CP0DMU5 169 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 HLA-DMBP28068 263 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 FAM90A2PQ658T7 463 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 TCF24Q7RTU0 167 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 GBGT1Q8N5D6 347 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 OR51H1Q8NH63 302 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 TXN2Q99757 166 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 HINT2Q9BX68 163 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 FKBP11Q9NYL4 201 aa9.17□□□□□ -0.94
SKA3-206ENST00000475251 IGHV3-49A0A0A0MS15 119 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 TRDV1A0A1B0GX56 115 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 MARCH11A6NNE9 402 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 SSX5O60225 188 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 SNAPC5O75971 98 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 SPP1P10451 314 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 MFAP4P55083 255 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 FXYD4P59646 89 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 DEFB131AP59861 70 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 MORN3Q6PF18 240 aaPredicted RBP9.16□□□□□ -0.94
SKA3-206ENST00000475251 Q6ZTC4 211 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 ZNF367Q7RTV3 350 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 CADM3Q8N126 398 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 POM121L12Q8N7R1 296 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 OR1P1Q8NH06 330 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 NDUFB11Q9NX14 153 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 PRNDQ9UKY0 176 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 OR51B2Q9Y5P1 312 aa9.16□□□□□ -0.94
SKA3-206ENST00000475251 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 NOTOA8MTQ0 251 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 ST8SIA3O43173 380 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 AMBPP02760 352 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 RPL11P62913 178 aaKnown RBP9.15□□□□□ -0.94
SKA3-206ENST00000475251 TBCEQ15813 527 aaPredicted RBP9.15□□□□□ -0.94
SKA3-206ENST00000475251 LEMD1Q68G75 181 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 ZNF818PQ6ZRF7 136 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 TPRA1Q86W33 373 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 DUSP18Q8NEJ0 188 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 TSPAN14Q8NG11 270 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 GIMAP1Q8WWP7 306 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 SLC25A46Q96AG3 418 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 TSC22D3Q99576 134 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 NXF2Q9GZY0 626 aaKnown RBP9.15□□□□□ -0.94
SKA3-206ENST00000475251 MS4A6AQ9H2W1 248 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 TMEM231Q9H6L2 316 aa9.15□□□□□ -0.94
SKA3-206ENST00000475251 GNG7O60262 68 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 RBMY1A1P0DJD3 496 aaKnown RBP9.14□□□□□ -0.95
SKA3-206ENST00000475251 RBMY1CP0DJD4 496 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 F2RP25116 425 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 HERV-K104P61576 105 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 RBMY1FQ15415 496 aaKnown RBP9.14□□□□□ -0.95
SKA3-206ENST00000475251 C22orf42Q6IC83 251 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 TMEM17Q86X19 198 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 HOGA1Q86XE5 327 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 MISP3Q96FF7 219 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 NDUFAF3Q9BU61 184 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 FAT2Q9NYQ8 4349 aa9.14□□□□□ -0.95
SKA3-206ENST00000475251 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 DEFB131BA0A096LNP1 70 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 ZNF705EA8MWA4 302 aaPredicted RBP9.13□□□□□ -0.95
SKA3-206ENST00000475251 KRASP01116 189 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 LGALS9BQ3B8N2 356 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 SOHLH1Q5JUK2 328 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 ST8SIA2Q92186 375 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 ZNF414Q96IQ9 312 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 VSIRQ9H7M9 311 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 RHBDL2Q9NX52 303 aa9.13□□□□□ -0.95
SKA3-206ENST00000475251 BLOC1S6Q9UL45 172 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms