RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MARCH1Q8TCQ1 289 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 VN1R17PQ8TDU5 208 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 COPZ2Q9P299 210 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 SELENOKQ9Y6D0 94 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 C3orf85A0A1B0GTC6 90 aa13.54□□□□□ -0.24
UPF3A-203ENST00000474056 TGOLN2O43493 480 aa13.54□□□□□ -0.24
UPF3A-203ENST00000474056 IGKV1-5P01602 117 aa13.54□□□□□ -0.24
UPF3A-203ENST00000474056 PLET1Q6UQ28 207 aa13.54□□□□□ -0.24
UPF3A-203ENST00000474056 ZFAND1Q8TCF1 268 aa13.54□□□□□ -0.24
UPF3A-203ENST00000474056 RCHY1Q96PM5 261 aa13.54□□□□□ -0.24
UPF3A-203ENST00000474056 TENM3Q9P273 2699 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 OR2T8A6NH00 312 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 ZNF785A8K8V0 405 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 K7EIM0 57 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 CTSDP07339 412 aaPredicted RBP13.53□□□□□ -0.24
UPF3A-203ENST00000474056 P0C879 139 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 CBLN1P23435 193 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 PRCDQ00LT1 54 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 MEF2DQ14814 521 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 SP6Q3SY56 376 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 OR2C3Q8N628 320 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 CCDC71LQ8N9Z2 235 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 OR4C16Q8NGL9 310 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 SCARB1Q8WTV0 552 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 TECRQ9NZ01 308 aaKnown RBP13.53□□□□□ -0.24
UPF3A-203ENST00000474056 RABL2AQ9UBK7 228 aaPredicted RBP13.53□□□□□ -0.24
UPF3A-203ENST00000474056 RABL2BQ9UNT1 228 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 CEPT1Q9Y6K0 416 aa13.53□□□□□ -0.24
UPF3A-203ENST00000474056 DNAH7Q8WXX0 4024 aa13.52□□□□□ -0.24
UPF3A-203ENST00000474056 DISC1C4P0D8 188 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 F8W735 103 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-203ENST00000474056 AKAIN1P0CW23 69 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 AKR1C2P52895 323 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 CD81P60033 236 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.25
UPF3A-203ENST00000474056 TM4SF20Q53R12 229 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 SPINK9Q5DT21 86 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 UXS1Q8NBZ7 420 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 OR1L6Q8NGR2 347 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 OR1P1Q8NH06 330 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 WDR89Q96FK6 387 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-203ENST00000474056 ZNF436Q9C0F3 470 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-203ENST00000474056 NXF2Q9GZY0 626 aaKnown RBP13.52□□□□□ -0.25
UPF3A-203ENST00000474056 C21orf62Q9NYP8 219 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 MLXQ9UH92 298 aa13.52□□□□□ -0.25
UPF3A-203ENST00000474056 CD7P09564 240 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 UCP1P25874 307 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 GUCA2BQ16661 112 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 TRIM16LQ309B1 348 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 UBAC2Q8NBM4 344 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 BSCL2Q96G97 398 aaPredicted RBP13.51□□□□□ -0.25
UPF3A-203ENST00000474056 NEURL2Q9BR09 285 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 RTBDNQ9BSG5 229 aaPredicted RBP13.51□□□□□ -0.25
UPF3A-203ENST00000474056 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 ZMAT4Q9H898 229 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 PLEKHA3Q9HB20 300 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 PALMDQ9NP74 551 aa13.51□□□□□ -0.25
UPF3A-203ENST00000474056 A0A0B4J293 547 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 A0A0G2JRQ6 117 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 GSTZ1O43708 216 aaPredicted RBP13.5□□□□□ -0.25
UPF3A-203ENST00000474056 TNFSF8P32971 234 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 ZNF57Q68EA5 555 aaPredicted RBP13.5□□□□□ -0.25
UPF3A-203ENST00000474056 BTNL8Q6UX41 500 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 TMEM61Q8N0U2 210 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 ZNF114Q8NC26 417 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 MCFD2Q8NI22 146 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 TMEM190Q8WZ59 177 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 MISP3Q96FF7 219 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 SOSTQ9BQB4 213 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 WFDC10AQ9H1F0 79 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 C5orf66Q9H5L9 145 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 TUBA4BQ9H853 241 aa13.5□□□□□ -0.25
UPF3A-203ENST00000474056 C14orf166Q9Y224 244 aaKnown RBP13.5□□□□□ -0.25
UPF3A-203ENST00000474056 ST8SIA3O43173 380 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 OR5AC1P0C628 307 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 C8orf88P0DMB2 117 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 ADMP35318 185 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 Q56UQ5 140 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 OR51S1Q8NGJ8 323 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 ATP6V0BQ99437 205 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 RSL24D1Q9UHA3 163 aaKnown RBP13.49□□□□□ -0.25
UPF3A-203ENST00000474056 GPR132Q9UNW8 380 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 UFC1Q9Y3C8 167 aa13.49□□□□□ -0.25
UPF3A-203ENST00000474056 FABP12A6NFH5 140 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 I3L2K1 104 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 ATG12O94817 140 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 ELLP55199 621 aaPredicted RBP13.48□□□□□ -0.25
UPF3A-203ENST00000474056 SURF2Q15527 256 aaPredicted RBP13.48□□□□□ -0.25
UPF3A-203ENST00000474056 HAGHQ16775 308 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 SPSB3Q6PJ21 355 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 DEFB125Q8N687 156 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 SLC35G3Q8N808 338 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 LHFPL5Q8TAF8 219 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 GLYATL2Q8WU03 294 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 TMEM222Q9H0R3 208 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 NAA60Q9H7X0 242 aa13.48□□□□□ -0.25
UPF3A-203ENST00000474056 SLC2A8Q9NY64 477 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms