RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 SOSTQ9BQB4 213 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 RBM38Q9H0Z9 239 aaKnown RBP9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 C14orf166Q9Y224 244 aaKnown RBP9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 NSG2Q9Y328 171 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 DMRT1Q9Y5R6 373 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 CSMD3Q7Z407 3707 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 ANKRD20A5PA0PJZ0 165 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 CSN3P07498 182 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 UCP1P25874 307 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 ARL3P36405 182 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 FAAP20Q6NZ36 180 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 GPHB5Q86YW7 130 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 OR4C16Q8NGL9 310 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 OR2K2Q8NGT1 345 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 MARCH1Q8TCQ1 289 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 VN1R17PQ8TDU5 208 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 TP53RKQ96S44 253 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 ATP6V0BQ99437 205 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 HINT2Q9BX68 163 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 SLC2A8Q9NY64 477 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 NDUFA13Q9P0J0 144 aa9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 F11RQ9Y624 299 aaKnown RBP9.86□□□□□ -0.83
SHROOM3-204ENST00000473602 MFSD2BA6NFX1 497 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 PPP5D1E7EU14 171 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 S100A5P33763 92 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 MECP2P51608 486 aaKnown RBP9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 AKR1C2P52895 323 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 ZFAND6Q6FIF0 208 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 LCN12Q6JVE5 192 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 CLEC19AQ6UXS0 136 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 Q8N402 240 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 ZNF502Q8TBZ5 544 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 SCP2D1Q9UJQ7 156 aa9.85□□□□□ -0.83
SHROOM3-204ENST00000473602 DBX1A6NMT0 343 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 A8MWP6 167 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 P0C879 139 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 HSPE1P61604 102 aaKnown RBP9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 PRCDQ00LT1 54 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 TRIM16LQ309B1 348 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 FAM106AQ4KMX7 169 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 ZNF114Q8NC26 417 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 OR1P1Q8NH06 330 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 SCGB3A2Q96PL1 93 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 S4R3C0 116 aa9.84□□□□□ -0.83
SHROOM3-204ENST00000473602 TEX13DA0A0J9YY54 714 aaPredicted RBP9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 OR2C1O95371 312 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 IGKV1-5P01602 117 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 IGHV3-23P01764 117 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 CLEC3BP05452 202 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 FAUP35544 74 aaKnown RBP9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 AP3S2P59780 193 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 HAPLN4Q86UW8 402 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 FAM219AQ8IW50 185 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 OR2C3Q8N628 320 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 OR51S1Q8NGJ8 323 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 DEDD2Q8WXF8 326 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 RRNAD1Q96FB5 475 aaKnown RBP9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 RTBDNQ9BSG5 229 aaPredicted RBP9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 THAP7Q9BT49 309 aaPredicted RBP9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 TMEM222Q9H0R3 208 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 C5orf66Q9H5L9 145 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 NAA60Q9H7X0 242 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 PLEKHA3Q9HB20 300 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 GPR132Q9UNW8 380 aa9.83□□□□□ -0.84
SHROOM3-204ENST00000473602 CRYM-AS1A6NIL9 109 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 C2orf70A6NJV1 201 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 INS-IGF2F8WCM5 200 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 CDS2O95674 445 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 HLA-AP01891 365 aaKnown RBP9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 OR5AC1P0C628 307 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 GPR183P32249 361 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 MFAP2P55001 183 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 ERHP84090 104 aaKnown RBP9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 DHODHQ02127 395 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 SP6Q3SY56 376 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 SPSB3Q6PJ21 355 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 PLET1Q6UQ28 207 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 RNASE11Q8TAA1 199 aaKnown RBP9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 DYNLRB2Q8TF09 96 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 TRIM63Q969Q1 353 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 BSCL2Q96G97 398 aaPredicted RBP9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 PDCD10Q9BUL8 212 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 C21orf62Q9NYP8 219 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 TECRQ9NZ01 308 aaKnown RBP9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 V9GYH0 126 aa9.82□□□□□ -0.84
SHROOM3-204ENST00000473602 A0A0B4J293 547 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 K7EIM0 57 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 TGOLN2O43493 480 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 FOLR2P14207 255 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 ETV6P41212 452 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 ELLP55199 621 aaPredicted RBP9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 PYDC2Q56P42 97 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 CCDC190Q86UF4 302 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 GTSCR1Q86UQ5 136 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 SGPP2Q8IWX5 399 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 SLC35G3Q8N808 338 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 SCARB1Q8WTV0 552 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 GLYATL2Q8WU03 294 aa9.81□□□□□ -0.84
SHROOM3-204ENST00000473602 RBPMSQ93062 196 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms