RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 UQCC3Q6UW78 93 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 OR11H6Q8NGC7 330 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 FAM168AQ92567 244 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 TBX15Q96SF7 602 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 SIRPDQ9H106 197 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 GNG13Q9P2W3 67 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 ZNF257Q9Y2Q1 563 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 AMMECR1Q9Y4X0 333 aaPredicted RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 ITPR2Q14571 2701 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 MXRA5Q9NR99 2828 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 IGHV2-70DA0A0C4DH43 119 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 ZFP92A6NM28 416 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 TOX4O94842 621 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 MDKP21741 143 aaPredicted RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 DVL1P1P54792 670 aaPredicted RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 RPP30P78346 268 aaKnown RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 SSBP2P81877 361 aaPredicted RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 PLGLAQ15195 96 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 PRSS8Q16651 343 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 ZNF787Q6DD87 383 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 IQCF2Q8IXL9 164 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 ZNF709Q8N972 641 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 OR5B3Q8NH48 314 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 OR2T6Q8NHC8 308 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 RXFP4Q8TDU9 374 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 GATAD1Q8WUU5 269 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 CFHR4Q92496 578 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 FAM103A1Q9BTL3 118 aaKnown RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 SIGLEC9Q9Y336 463 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 ZNF469Q96JG9 3925 aaPredicted RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 IGKV1OR2-108A0A075B7D4 117 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 MAP1LC3B2A6NCE7 125 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 SOX15O60248 233 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 AKR1C3P42330 323 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 NPBWR1P48145 328 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 MMDQ15546 238 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 HIST2H2BCQ6DN03 193 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 MAPK1IP1LQ8NDC0 245 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 OR10G4Q8NGN3 311 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 OR10G9Q8NGN4 311 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 OR10G7Q8NGN6 311 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 VSTM2AQ8TAG5 236 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 SPOCK3Q9BQ16 436 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 GGTLC1Q9BX51 225 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 MAP1LC3BQ9GZQ8 125 aa4.99□□□□□ -1.61
CLK1-210ENST00000473565 MRPL36Q9P0J6 103 aaKnown RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 KLF2Q9Y5W3 355 aaPredicted RBP4.99□□□□□ -1.61
CLK1-210ENST00000473565 CREBBPQ92793 2442 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 FAM74A7A6NL05 159 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 NUDT19A8MXV4 375 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 ACTL6BO94805 426 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 YIF1AO95070 293 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 CRYGBP07316 175 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 SNRNP70P08621 437 aaKnown RBP4.98□□□□□ -1.61
CLK1-210ENST00000473565 COX6B1P14854 86 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 SERF2P84101 59 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 FAM74A3Q4VXF1 159 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 TMEM88Q6PEY1 159 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 C10orf105Q8TEF2 133 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 ACY3Q96HD9 319 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 C20orf24Q9BUV8 137 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 FKBP11Q9NYL4 201 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 SOX21Q9Y651 276 aaPredicted RBP4.98□□□□□ -1.61
CLK1-210ENST00000473565 RBFOX3A6NFN3 312 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 LGALS7P47929 136 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 MFAP2P55001 183 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 DLK1P80370 383 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 ICAM4Q14773 271 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 FAM120AOSQ5T036 256 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 SPATA31B1PQ5VZV4 182 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 CENPVQ7Z7K6 275 aaPredicted RBP4.98□□□□□ -1.61
CLK1-210ENST00000473565 PPP1R27Q86WC6 154 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 RAB24Q969Q5 203 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 EAF1Q96JC9 268 aaPredicted RBP4.98□□□□□ -1.61
CLK1-210ENST00000473565 P2RX4Q99571 388 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 PIMREGQ9BSJ6 248 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 PARD6GQ9BYG4 376 aaPredicted RBP4.98□□□□□ -1.61
CLK1-210ENST00000473565 FNDC4Q9H6D8 234 aaPredicted RBP4.98□□□□□ -1.61
CLK1-210ENST00000473565 SLC39A9Q9NUM3 307 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 KPTNQ9Y664 436 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 PXMP4Q9Y6I8 212 aa4.98□□□□□ -1.61
CLK1-210ENST00000473565 IGLC7A0M8Q6 106 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 RPL27AP46776 148 aaKnown RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 ERHP84090 104 aaKnown RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 GAMTQ14353 236 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 CLEC2AQ6UVW9 174 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 BRD3OSQ6XYD6 125 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 PIP4P2Q8N4L2 257 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 TEX45Q8NA69 505 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 NPVFQ9HCQ7 196 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 KIAA1456Q9P272 454 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 LSM4Q9Y4Z0 139 aaKnown RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 TIMM9Q9Y5J7 89 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 HECTD1Q9ULT8 2610 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 SH2D7A6NKC9 451 aaPredicted RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 SCAF4O95104 1147 aaKnown RBP4.97□□□□□ -1.61
CLK1-210ENST00000473565 SAA4P35542 130 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 PEA15Q15121 130 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 BSXQ3C1V8 233 aa4.97□□□□□ -1.61
CLK1-210ENST00000473565 C2orf83Q53S99 150 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms