RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TMEM235A6NFC5 223 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 J3QRK9 145 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 K7N7A8 449 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ORC5O43913 435 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 SOX15O60248 233 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF861PO60384 105 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 RP2O75695 350 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 UPK1BO75841 260 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 OR2H2O95918 312 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 CYB5R3P00387 301 aaPredicted RBP3.53□□□□□ -1.84
CCDC39-202ENST00000471307 CSN2P05814 226 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 CD3GP09693 182 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 CSF3P09919 207 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 IL7P13232 177 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 DTYMKP23919 212 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 CD80P33681 288 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 GABRA2P47869 451 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 INPP1P49441 399 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 DEFA1P59665 94 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 DEFA3P59666 94 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 GNG2P59768 71 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 AP3S2P59780 193 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ACTBP60709 375 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 GNB2P62879 340 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ACTG1P63261 375 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ARFRP1Q13795 201 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM155Q4W5P6 130 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 TRIQKQ629K1 86 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 STUMQ69YW2 141 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 C19orf35Q6ZS72 473 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 SLC36A1Q7Z2H8 476 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 C6orf201Q7Z4U5 140 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 SNX29P2Q8IUI4 249 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF561Q8N587 486 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 SUMF2Q8NBJ7 301 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 C19orf18Q8NEA5 215 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 LRRC20Q8TCA0 184 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 NEK7Q8TDX7 302 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 YIPF5Q969M3 257 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 CMSS1Q9BQ75 279 aaKnown RBP3.53□□□□□ -1.84
CCDC39-202ENST00000471307 SULT4A1Q9BR01 284 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM165Q9HC07 324 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 KAAG1Q9UBP8 84 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 MTFP1Q9UDX5 166 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF222Q9UK12 451 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 RBMX2Q9Y388 322 aaKnown RBP3.53□□□□□ -1.84
CCDC39-202ENST00000471307 CACNG2Q9Y698 323 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 APCP25054 2843 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 MAP1AP78559 2803 aaPredicted RBP3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ANKRD17O75179 2603 aaKnown RBP3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ABCA12Q86UK0 2595 aa3.53□□□□□ -1.85
CCDC39-202ENST00000471307 IGHV3OR15-7A0A075B7D8 119 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 A0A1W2PPV4 95 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 ANKRD20A5PA0PJZ0 165 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 NAP1L6A6NFF2 107 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 CENPXA8MT69 81 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 LYNX1G3V0Z9 82 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 SIRPB1O00241 398 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF737O75373 536 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 NAPSAO96009 420 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 IGHG4P01861 327 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 GYPAP02724 150 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 MT-ND4P03905 459 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 CTXN2P0C2S0 81 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 LYNX1P0DP58 116 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 PTHLHP12272 177 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 TBPP20226 339 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 GZMHP20718 246 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 ERP29P30040 261 aaKnown RBP3.52□□□□□ -1.85
CCDC39-202ENST00000471307 RCVRNP35243 200 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 FAUP35544 74 aaKnown RBP3.52□□□□□ -1.85
CCDC39-202ENST00000471307 HNRNPA3P51991 378 aaKnown RBP3.52□□□□□ -1.85
CCDC39-202ENST00000471307 TAS2R19P59542 299 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 MEF2CQ06413 473 aaPredicted RBP3.52□□□□□ -1.85
CCDC39-202ENST00000471307 MADCAM1Q13477 382 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 PRR4Q16378 134 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 FAM201AQ5SY85 155 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 PVRIGQ6DKI7 326 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 Q6ZS49 121 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 GDPD3Q7L5L3 318 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 MOB1BQ7L9L4 216 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 TRAPPC6BQ86SZ2 158 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 TGIF2LYQ8IUE0 185 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 GAPTQ8N292 157 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 TOMM5Q8N4H5 51 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 SPICQ8N5J4 248 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 Q8N9L7 120 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 ASCC1Q8N9N2 400 aaKnown RBP3.52□□□□□ -1.85
CCDC39-202ENST00000471307 TMEM229BQ8NBD8 167 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 DEFB108BQ8NET1 73 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 OR4S1Q8NGB4 309 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 RNF2Q99496 336 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 CCL13Q99616 98 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 C7orf50Q9BRJ6 194 aaKnown RBP3.52□□□□□ -1.85
CCDC39-202ENST00000471307 TMEM246Q9BRR3 403 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 RBKSQ9H477 322 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 C12orf4Q9NQ89 552 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 IFT46Q9NQC8 304 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 AK3Q9UIJ7 227 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms