RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SPCS3P61009 180 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 RUNX1Q01196 453 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 NECAP1Q8NC96 275 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 KLHL30-AS1Q8NEE0 82 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR4F17Q8NGA8 305 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR52B4Q8NGK2 314 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 USMG5Q96IX5 58 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR4F4Q96R69 305 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 HINT2Q9BX68 163 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 IGLV11-55A0A075B6I3 123 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 A0A0G2JLM5 398 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 PITX3O75364 302 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 IFNA17P01571 189 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR13C7P0DN81 318 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 NSUN5P1Q3KNT7 163 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 GGNBP1Q5YKI7 109 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR2C3Q8N628 320 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR1L6Q8NGR2 347 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 MS4A10Q96PG2 267 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 FANCD2OSQ96PS1 177 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 SEC22CQ9BRL7 303 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 ZNF355PQ9NSJ1 428 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 HSPB7Q9UBY9 170 aa11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-203ENST00000470278 A0A1W2PRX2 142 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 SNRPGP15A8MWD9 76 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 FAM90A26D6RGX4 464 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 INMT-MINDY4F8WBC2 141 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 I3L521 148 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 CYB5BO43169 146 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 ADAP1O75689 374 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 REG1AP05451 166 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 HOXB5P09067 269 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 LGALS1P09382 135 aaKnown RBP11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 RHOGP84095 191 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 C18orf65Q6ZTR6 163 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 OR1P1Q8NH06 330 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 GNB4Q9HAV0 340 aa11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 GPN1Q9HCN4 374 aaPredicted RBP11.58□□□□□ -0.56
CDC42SE1-203ENST00000470278 NUDT19A8MXV4 375 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 TSPAN15O95858 294 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 IFNA21P01568 189 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 PRH1P02810 166 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 DEFA4P12838 97 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 HOXA1P49639 335 aaPredicted RBP11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 ERHP84090 104 aaKnown RBP11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 TNFRSF9Q07011 255 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 FHL3Q13643 280 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 BSXQ3C1V8 233 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 FAM209BQ5JX69 171 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 C19orf35Q6ZS72 473 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 C8orf86Q6ZUL3 223 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 THYN1Q9P016 225 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 DMRT1Q9Y5R6 373 aa11.57□□□□□ -0.56
CDC42SE1-203ENST00000470278 C13orf42A0A1B0GVH6 325 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 SPNP16150 400 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 RGS21Q2M5E4 152 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 C15orf32Q32M92 178 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 SPINK9Q5DT21 86 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 PVRIGQ6DKI7 326 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 ETV3LQ6ZN32 361 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 C12orf45Q8N5I9 185 aaPredicted RBP11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 P2RX4Q99571 388 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 NOTCH3Q9UM47 2321 aa11.56□□□□□ -0.56
CDC42SE1-203ENST00000470278 MPTX1A8MV57 137 aa11.55□□□□□ -0.56
CDC42SE1-203ENST00000470278 OR2J3O76001 311 aa11.55□□□□□ -0.56
CDC42SE1-203ENST00000470278 MFAP2P55001 183 aa11.55□□□□□ -0.56
CDC42SE1-203ENST00000470278 ZNF343Q6P1L6 599 aa11.55□□□□□ -0.56
CDC42SE1-203ENST00000470278 RAX2Q96IS3 184 aa11.55□□□□□ -0.56
CDC42SE1-203ENST00000470278 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
CDC42SE1-203ENST00000470278 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 MYCNOSP40205 109 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 HTR2BP41595 481 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 DEFA5Q01523 94 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 ATP5G2Q06055 141 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 OR4D5Q8NGN0 318 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 DTD1Q8TEA8 209 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 CXorf58Q96LI9 332 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 COL7A1Q02388 2944 aa11.54□□□□□ -0.56
CDC42SE1-203ENST00000470278 CCL24O00175 119 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 CORTO00230 105 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 MED6O75586 246 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 NDUFB8O95169 186 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 LY86O95711 162 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 PF4P02776 101 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 RNASE2P10153 161 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 SNCAP37840 140 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 SUB1P53999 127 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 EXOSC2Q13868 293 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 TATDN3Q17R31 274 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 IAH1Q2TAA2 248 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 DEFB136Q30KP8 78 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 SLC24A4Q8NFF2 622 aa11.53□□□□□ -0.56
CDC42SE1-203ENST00000470278 VN1R17PQ8TDU5 208 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms