RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 PRELID3BQ9Y3B1 194 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 MAST4O15021 2626 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SONP18583 2426 aaKnown RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 TRAV3A0A0B4J244 114 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 RNF212BA8MTL3 300 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 H3BUX3 64 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 HPRT1P00492 218 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 MOSP00540 346 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 APOA2P02652 100 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SERPINE2P07093 398 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SAA1P0DJI8 122 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 S100GP29377 79 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 S100A11P31949 105 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 MC5RP33032 325 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SRP14P37108 136 aaKnown RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 S100A10P60903 97 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 POLR2GP62487 172 aaKnown RBP eCLIP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SSBP2P81877 361 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 PJVKQ0ZLH3 352 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 HES1Q14469 280 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 LY6EQ16553 131 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 RTL8BQ17RB0 113 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 IAH1Q2TAA2 248 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 LRRC75BQ2VPJ9 315 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 GGNBP1Q5YKI7 109 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 IGFL4Q6B9Z1 124 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 ACSM6Q6P461 480 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 GSG1LQ6UXU4 331 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SSX9Q7RTT3 188 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 SIGLECL1Q8N7X8 197 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 OR4C13Q8NGP0 309 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 OR4S2Q8NH73 311 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 OSR1Q8TAX0 266 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 GLMPQ8WWB7 406 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 NPIPB3Q92617 1050 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 RBPMSQ93062 196 aaKnown RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 MARC2Q969Z3 335 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 FLYWCH2Q96CP2 140 aaKnown RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 CXorf58Q96LI9 332 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 HARBI1Q96MB7 349 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 DUX5Q96PT3 197 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 ESM1Q9NQ30 184 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 TNFRSF19Q9NS68 423 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 FAM212BQ9NTI7 297 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 GAR1Q9NY12 217 aaKnown RBP3.75□□□□□ -1.81
SF3B1-208ENST00000470268 TNFSF18Q9UNG2 199 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 NSG2Q9Y328 171 aa3.75□□□□□ -1.81
SF3B1-208ENST00000470268 FN1P02751 2386 aaKnown RBP3.74□□□□□ -1.81
SF3B1-208ENST00000470268 A0A0B4J2A0 478 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 A6NDX4 124 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 SH2D7A6NKC9 451 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-208ENST00000470268 HMSDA8MTL9 139 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 FCN1O00602 326 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 SLC25A17O43808 307 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 CHST1O43916 411 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 CRYGBP07316 175 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 OR9G9P0C7N8 305 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 FAM106CPP0CH98 169 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 RRASP10301 218 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 MYOD1P15172 320 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 HLA-GP17693 338 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 SRD5A1P18405 259 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 PSMB6P28072 239 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 BRS3P32247 399 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 KIR2DS2P43631 304 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 SRSF4Q08170 494 aaKnown RBP3.74□□□□□ -1.81
SF3B1-208ENST00000470268 IL15RAQ13261 267 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 PSG5Q15238 335 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 MMDQ15546 238 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 POU2AF1Q16633 256 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 NMSQ5H8A3 153 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 DHRS7BQ6IAN0 325 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-208ENST00000470268 DGAT2L7PQ6IED9 249 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 OR4A47Q6IF82 309 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF695Q8IW36 515 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 PUSL1Q8N0Z8 303 aaKnown RBP3.74□□□□□ -1.81
SF3B1-208ENST00000470268 LGI3Q8N145 548 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 FAM71E2Q8N5Q1 922 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 TCTEX1D1Q8N7M0 179 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 OR2T10Q8NGZ9 312 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 OR1S1Q8NH92 325 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 COQ8AQ8NI60 647 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 CD300LFQ8TDQ1 290 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 DCUN1D4Q92564 292 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 TAF15Q92804 592 aaKnown RBP eCLIP3.74□□□□□ -1.81
SF3B1-208ENST00000470268 GPR146Q96CH1 333 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 SHPKQ9UHJ6 478 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 TCF19Q9Y242 345 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 LSM5Q9Y4Y9 91 aaKnown RBP3.74□□□□□ -1.81
SF3B1-208ENST00000470268 F8P00451 2351 aa3.74□□□□□ -1.81
SF3B1-208ENST00000470268 E7EUB6 86 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CRLF1O75462 422 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 NDUFA3O95167 84 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 MBPP02686 304 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-208ENST00000470268 NQO2P16083 231 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 HNF1AP20823 631 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 VDAC1P21796 283 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 AKR1C2P52895 323 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 AANATQ16613 207 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF674Q2M3X9 581 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms