RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 Q6ZS92 163 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 KIR2DL5AQ8N109 375 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 NUP37Q8NFH4 326 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 MISP3Q96FF7 219 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 LINC00312Q9Y6C7 94 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 CBLN1P23435 193 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 PAFAH1B2P68402 229 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 CD69Q07108 199 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 Q0VG73 95 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 MOB3BQ86TA1 216 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 OSR1Q8TAX0 266 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-209ENST00000470026 CMTM2Q8TAZ6 248 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 WFIKKN1Q96NZ8 548 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 LRFN3Q9BTN0 628 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 MRPL18Q9H0U6 180 aaKnown RBP11.12□□□□□ -0.63
BRCA1-209ENST00000470026 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
BRCA1-209ENST00000470026 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-209ENST00000470026 hADV38S2A0JD32 116 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 SAA1P0DJI8 122 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-209ENST00000470026 TNFSF4P23510 183 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 CD40P25942 277 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 OR10J1P30954 320 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 RPEL1Q2QD12 228 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 KRTCAP3Q53RY4 240 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 CENPWQ5EE01 88 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 ALKBH2Q6NS38 261 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 MMD2Q8IY49 270 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 DEFB108BQ8NET1 73 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 FAM122AQ96E09 287 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 HINT2Q9BX68 163 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 NAGKQ9UJ70 344 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 A0A1W2PRE2 83 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 HELTA6NFD8 242 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 ACTL6BO94805 426 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 CRYBB3P26998 211 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 MS4A10Q96PG2 267 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 GNB1LQ9BYB4 327 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 NDUFA4L2Q9NRX3 87 aa11.11□□□□□ -0.63
BRCA1-209ENST00000470026 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
BRCA1-209ENST00000470026 GNG4P50150 75 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 TAS2R45P59539 299 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 ERVFC1-1P60608 527 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 MEF2CQ06413 473 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-209ENST00000470026 TMEM177Q53S58 311 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 OR5AN1Q8NGI8 311 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
BRCA1-209ENST00000470026 SLC25A33Q9BSK2 321 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 MRPL32Q9BYC8 188 aaKnown RBP11.1□□□□□ -0.63
BRCA1-209ENST00000470026 TMEM106BQ9NUM4 274 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 DYSFO75923 2080 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 TNCP24821 2201 aa11.1□□□□□ -0.63
BRCA1-209ENST00000470026 GRIFINA4D1Z8 144 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 ISLRO14498 428 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 IGLV2-8P01709 118 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 CRISP2P16562 243 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 CX3CL1P78423 397 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 OR5I1Q13606 314 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 OR9G1Q8NH87 305 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 ZNF714Q96N38 554 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 ZNRD1Q9P1U0 126 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 H0YJW9 148 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 SCGB1D1O95968 90 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 C8orf88P0DMB2 117 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 NDUFB7P17568 137 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 TPPP2P59282 170 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 RANP62826 216 aaKnown RBP11.09□□□□□ -0.63
BRCA1-209ENST00000470026 FAM27E3Q08E93 113 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 COX19Q49B96 90 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 Q6ZWC4 215 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 FAM167A-AS1Q96KT0 104 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 RNF2Q99496 336 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 GAL3ST2Q9H3Q3 398 aa11.09□□□□□ -0.63
BRCA1-209ENST00000470026 LOC400499M0QZD8 3231 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 DLL1O00548 723 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 MT-ND6P03923 174 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 FRMD6-AS1P0C7T7 363 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 RNF224P0DH78 156 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 IRF2P14316 349 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 GATA2P23769 480 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-209ENST00000470026 PPOXP50336 477 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 MLANAQ16655 118 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 ZNF596Q8TC21 504 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 MRPL20Q9BYC9 149 aaKnown RBP11.08□□□□□ -0.64
BRCA1-209ENST00000470026 NKX6-3A6NJ46 265 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 FCN1O00602 326 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 FCN3O75636 299 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 SERF1AO75920 110 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 IER3P46695 156 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 FAM71F2Q6NXP2 309 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 TEX43Q6ZNM6 134 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 DMRTC2Q8IXT2 367 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-209ENST00000470026 OR8I2Q8N0Y5 310 aa11.08□□□□□ -0.64
BRCA1-209ENST00000470026 ST6GALNAC3Q8NDV1 305 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms