RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 THOC7Q6I9Y2 204 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 RABAC1Q9UI14 185 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 F11RQ9Y624 299 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 C16orf90A8MZG2 172 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 CD5P06127 495 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 PSMA1P25786 263 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 CATR1Q13166 79 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 C12orf74Q32Q52 190 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 TMEM41BQ5BJD5 291 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 OR1L8Q8NGR8 309 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 DGCR14Q96DF8 476 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 DCSTAMPQ9H295 470 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 CLEC5AQ9NY25 188 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 TBC1D24Q9ULP9 559 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 CELA1Q9UNI1 258 aa13.69□□□□□ -0.22
NCKIPSD-209ENST00000470006 K7EIM0 57 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 PDCD5O14737 125 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 NPY1RP25929 384 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 OR10A3P58181 314 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 HACD4Q5VWC8 232 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 MORN3Q6PF18 240 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 NUDCD2Q8WVJ2 157 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 OR10C1Q96KK4 312 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 SCRT1Q9BWW7 348 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 ANXA10Q9UJ72 324 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 X6R8D5 127 aa13.68□□□□□ -0.22
NCKIPSD-209ENST00000470006 IGHV3-66A0A0C4DH42 116 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 ZNF705EA8MWA4 302 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 RBFOX2O43251 390 aaKnown RBP eCLIP13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 SPP1P10451 314 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 ERVK-16P61578 105 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 FABP5Q01469 135 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 FAM24BQ8N5W8 94 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 DUSP18Q8NEJ0 188 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 ST8SIA2Q92186 375 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 LSM10Q969L4 123 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 GINS3Q9BRX5 216 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 CCDC90BQ9GZT6 254 aa13.67□□□□□ -0.22
NCKIPSD-209ENST00000470006 IFITM5A6NNB3 132 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 GIG44P09565 113 aaPredicted RBP13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 FCGR2CP31995 323 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 MFAP4P55083 255 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 GNG2P59768 71 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 ARPC4P59998 168 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 POU2AF1Q16633 256 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 C1orf134Q5TEV5 83 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 ZNF773Q6PK81 442 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 PACRGLQ8N7B6 248 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 OR13F1Q8NGS4 319 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 OR51H1Q8NH63 302 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 MISP3Q96FF7 219 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 SLC5A7Q9GZV3 580 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 C8orf4Q9NR00 106 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 TMEM14BQ9NUH8 114 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 SCN3BQ9NY72 215 aa13.66□□□□□ -0.22
NCKIPSD-209ENST00000470006 TMEM235A6NFC5 223 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 CDK2AP2O75956 126 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 C4BPBP20851 252 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 Q6ZRM9 215 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 TRPT1Q86TN4 253 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 ZBTB34Q8NCN2 500 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 ZNF414Q96IQ9 312 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 NDUFA4L2Q9NRX3 87 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 OR51B2Q9Y5P1 312 aa13.65□□□□□ -0.22
NCKIPSD-209ENST00000470006 KNCNA6PVL3 124 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 IGHV3-48P01763 117 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 APOHP02749 345 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 FXYD4P59646 89 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 AADACL3Q5VUY0 350 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 UBE2UQ5VVX9 321 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 Q6ZR54 194 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 LILRB2Q8N423 598 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 NXF2Q9GZY0 626 aaKnown RBP13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 PLEKHA2Q9HB19 425 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 ACOT13Q9NPJ3 140 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
NCKIPSD-209ENST00000470006 GNG7O60262 68 aa13.63□□□□□ -0.23
NCKIPSD-209ENST00000470006 SNAPC5O75971 98 aa13.63□□□□□ -0.23
NCKIPSD-209ENST00000470006 FGF2P09038 288 aa13.63□□□□□ -0.23
NCKIPSD-209ENST00000470006 RCN1Q15293 331 aa13.63□□□□□ -0.23
NCKIPSD-209ENST00000470006 ACTL10Q5JWF8 245 aa13.63□□□□□ -0.23
NCKIPSD-209ENST00000470006 STXBP6Q8NFX7 210 aa13.63□□□□□ -0.23
NCKIPSD-209ENST00000470006 TMEM56Q96MV1 263 aa13.63□□□□□ -0.23
NCKIPSD-209ENST00000470006 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 CASQ2O14958 399 aaPredicted RBP13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 PTHLHP12272 177 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 MYL9P24844 172 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 MSMO1Q15800 293 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 TOMM20LQ6UXN7 152 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 TXN2Q99757 166 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 TMEM231Q9H6L2 316 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 VSIRQ9H7M9 311 aa13.62□□□□□ -0.23
NCKIPSD-209ENST00000470006 MARCH11A6NNE9 402 aa13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 PPYP01298 95 aa13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 ZNF688P0C7X2 276 aa13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 RAB3BP20337 219 aa13.61□□□□□ -0.23
NCKIPSD-209ENST00000470006 MLLT11Q13015 90 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms