RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 WFDC5Q8TCV5 224 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 SOCS4Q8WXH5 440 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 ST8SIA1Q92185 356 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 RDH5Q92781 318 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM54Q969K7 222 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 SPTSSAQ969W0 71 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 NDFIP1Q9BT67 221 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF747Q9BV97 191 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 NPCDR1Q9BY65 106 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 RTN4RQ9BZR6 473 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM133Q9H2Q1 129 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 VSIRQ9H7M9 311 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 SLC25A22Q9H936 323 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 WDR54Q9H977 334 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 PHPT1Q9NRX4 125 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-207ENST00000468925 SPANXB1Q9NS25 103 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-207ENST00000468925 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-207ENST00000468925 HIF1ANQ9NWT6 349 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 LOXL2Q9Y4K0 774 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 LHFPL6Q9Y693 200 aa4.03□□□□□ -1.76
SF3B1-207ENST00000468925 LOC102724200A0A096LPH7 203 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 CENPVL3A0A0U1RRI6 287 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 KBTBD11-OT1A0A1B0GTJ5 212 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 A0A1B0GUS0 222 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 A0A1W2PP11 408 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 OOEPA6NGQ2 149 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 FRG2CA6NGY1 282 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 MBD3L5A6NJ08 208 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 C2CD4DB7Z1M9 353 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 C11orf98E9PRG8 122 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 K7EQS6 105 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 M0QXV9 152 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 KLF7O75840 302 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 NAPSAO96009 420 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 IGHG1P01857 330 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 IGHG3P01860 377 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 SPINK8P0C7L1 97 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 EVI2AP22794 236 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 TMPRSS3P57727 454 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 RPL32P62910 135 aaKnown RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 HERV-K104P63124 156 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 PSG7Q13046 419 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 FHL3Q13643 280 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 RUNX3Q13761 415 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 VGLL4Q14135 290 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 GAGE13Q4V321 117 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 PRR30Q53SZ7 412 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 SPANXN5Q5MJ07 72 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 IBA57Q5T440 356 aaKnown RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 Q6P435 159 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 ADAMTSL5Q6ZMM2 481 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 PQLC2Q6ZP29 291 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 DGAT2L6Q6ZPD8 337 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 Q6ZVH6 145 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 VN1R4Q7Z5H5 301 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 CA13Q8N1Q1 262 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 GAPTQ8N292 157 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 C2orf73Q8N5S3 287 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 TEX45Q8NA69 505 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 SMRP1Q8NCR6 262 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 GJC3Q8NFK1 279 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 VN1R2Q8NFZ6 395 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 OR1F12Q8NHA8 337 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 MBD3L2Q8NHZ7 208 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 GTSF1Q8WW33 167 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 FAM131CQ96AQ9 280 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 WWC2-AS2Q96NR7 200 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 TPPP3Q9BW30 176 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 LIME1Q9H400 295 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 MAP1LC3AQ9H492 121 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 C6orf106Q9H6K1 298 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 AKIRIN1Q9H9L7 192 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 THYN1Q9P016 225 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 RARRES3Q9UL19 164 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 WDR83OSQ9Y284 106 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 PIGLQ9Y2B2 252 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 ZNF835Q9Y2P0 537 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 OR2W1Q9Y3N9 320 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 RFNGQ9Y644 331 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 LAMA3Q16787 3333 aa4.02□□□□□ -1.77
SF3B1-207ENST00000468925 TDRD6O60522 2096 aaKnown RBP4.02□□□□□ -1.77
SF3B1-207ENST00000468925 TTC28Q96AY4 2481 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 OBSL1O75147 1896 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 LAMA2P24043 3122 aaKnown RBP4.01□□□□□ -1.77
SF3B1-207ENST00000468925 IGKV1D-8A0A087WSZ0 117 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 TMED7-TICAM2A0A0A6YYA0 188 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 IGHV1-24A0A0C4DH33 117 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 IGKV1-9A0A0C4DH69 117 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 EDDM13A0A1B0GTR0 161 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 A0A1W2PRD5 423 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 A0A1W2PRE2 83 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 A0A1W2PRF3 423 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 A0A1W2PRM7 423 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 C4orf51C9J302 202 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 TNFSF11O14788 317 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 FOXS1O43638 330 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 LMX1BO60663 402 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 UTS2O95399 124 aa4.01□□□□□ -1.77
SF3B1-207ENST00000468925 CA1P00915 261 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms