RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ODF3BA8MYP8 253 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 C22orf46C9J442 243 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 OVOL3O00110 214 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 PDE6DO43924 150 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 YIF1AO95070 293 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 CXorf1O96002 111 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 RPLP1P05386 114 aaKnown RBP6.14□□□□□ -1.43
COL6A3-208ENST00000468792 FBP1P09467 338 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 CEACAM3P40198 252 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 CD81P60033 236 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 RHOBP62745 196 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 PRSS8Q16651 343 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 MRGPRG-AS1Q2M3A8 158 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 TMEM88Q6PEY1 159 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 CBLN2Q8IUK8 224 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 LINC00528Q8N1L1 170 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.14□□□□□ -1.43
COL6A3-208ENST00000468792 IGFBPL1Q8WX77 278 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 MALSU1Q96EH3 234 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 RNF2Q99496 336 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 SSX3Q99909 188 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 SSBP3Q9BWW4 388 aaPredicted RBP6.14□□□□□ -1.43
COL6A3-208ENST00000468792 ZNF430Q9H8G1 570 aaPredicted RBP6.14□□□□□ -1.43
COL6A3-208ENST00000468792 RPS10P5Q9NQ39 176 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 DPM3Q9P2X0 92 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 SLC45A2Q9UMX9 530 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 PXMP4Q9Y6I8 212 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 COL6A6A6NMZ7 2263 aa6.14□□□□□ -1.43
COL6A3-208ENST00000468792 A0A1B0GV50 99 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 A0A1W2PPR1 153 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 CGB1A6NKQ9 187 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 ZFP92A6NM28 416 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 M0R036 132 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 CORTO00230 105 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 NUPL2O15504 423 aaKnown RBP6.13□□□□□ -1.43
COL6A3-208ENST00000468792 CLN5O75503 358 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 VENTXO95231 258 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 MT-CO2P00403 227 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 CRYGCP07315 174 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 LINC00869P0C866 280 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 ATF4P18848 351 aaPredicted RBP6.13□□□□□ -1.43
COL6A3-208ENST00000468792 GNLYP22749 145 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 HTR1DP28221 377 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 GPR6P46095 362 aaPredicted RBP6.13□□□□□ -1.43
COL6A3-208ENST00000468792 REG1BP48304 166 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 B2MP61769 119 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 SELENOTP62341 195 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 DIAPH2-AS1Q14236 149 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 GAMTQ14353 236 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 HNF4GQ14541 408 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 PSG5Q15238 335 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 AVPI1Q5T686 147 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 TPTE2P1Q5T6R2 138 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 MINOS1Q5TGZ0 78 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 ETFRF1Q6IPR1 90 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 FAM122CQ6P4D5 195 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 CYP2G1PQ6ZSU1 146 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 STPG3Q8N7X2 389 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 THAP8Q8NA92 274 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 NPBQ8NG41 125 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 RPEQ96AT9 228 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 YPEL4Q96NS1 127 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 CTDSP1Q9GZU7 261 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 SLC25A22Q9H936 323 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 SDF2L1Q9HCN8 221 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 POLR3KQ9Y2Y1 108 aaPredicted RBP6.13□□□□□ -1.43
COL6A3-208ENST00000468792 SIGLEC9Q9Y336 463 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 MINOS1-NBL1R4GNA1 71 aa6.13□□□□□ -1.43
COL6A3-208ENST00000468792 A0A1W2PPI3 338 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 F6UZH7 168 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 ENSAO43768 121 aaKnown RBP6.12□□□□□ -1.43
COL6A3-208ENST00000468792 IGHV2-5P01817 119 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 SNRNP70P08621 437 aaKnown RBP6.12□□□□□ -1.43
COL6A3-208ENST00000468792 AREGP15514 252 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 FGF8P55075 233 aaPredicted RBP6.12□□□□□ -1.43
COL6A3-208ENST00000468792 WT1-ASQ06250 92 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 EBI3Q14213 229 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 MIC13Q5XKP0 118 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 CCDC144NLQ6NUI1 221 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 PPP1R27Q86WC6 154 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 C1QL4Q86Z23 238 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 OR1L6Q8NGR2 347 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 OR1P1Q8NH06 330 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 GATAD1Q8WUU5 269 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 TMEM190Q8WZ59 177 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 HINT2Q9BX68 163 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 MRPL32Q9BYC8 188 aaKnown RBP6.12□□□□□ -1.43
COL6A3-208ENST00000468792 DOK5Q9P104 306 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 NAT8Q9UHE5 227 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 KLF2Q9Y5W3 355 aaPredicted RBP6.12□□□□□ -1.43
COL6A3-208ENST00000468792 PUS1Q9Y606 427 aaKnown RBP eCLIP6.12□□□□□ -1.43
COL6A3-208ENST00000468792 TACC2O95359 2948 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 IGSF10Q6WRI0 2623 aa6.12□□□□□ -1.43
COL6A3-208ENST00000468792 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 IGLC7A0M8Q6 106 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 E7EUB6 86 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 TGOLN2O43493 480 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 SLC25A17O43808 307 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 ACTL6BO94805 426 aa6.11□□□□□ -1.43
COL6A3-208ENST00000468792 NDUFA3O95167 84 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms