RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CD33P20138 364 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 C1orf194Q5T5A4 169 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 DUX4L9Q6RFH8 374 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 MBD3L2Q8NHZ7 208 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 IL36BQ9NZH7 164 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 PPIAL4AQ9Y536 164 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 FAM215AQ9Y5M1 114 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 OR51B2Q9Y5P1 312 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 KIR2DL5BA0A0G2JN68 375 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 KIR2DL5BA0A0G2JPC4 375 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 GRIFINA4D1Z8 144 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 KIR2DL5AQ8N109 375 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 RAB9BQ9NP90 201 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 TRGV10A0A0A0MS01 117 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 CBLN1P23435 193 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 PRR20EP86478 221 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 PRR20CP86479 221 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 PRR20DP86480 221 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 PRR20BP86481 221 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 PRR20AP86496 221 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 MIR17HGQ75NE6 70 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 C11orf52Q96A22 123 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 FAM122AQ96E09 287 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 MS4A10Q96PG2 267 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 BSNQ9UPA5 3926 aa12.93□□□□□ -0.34
TSPAN4-211ENST00000468468 LINC00869P0C866 280 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 GLRXP35754 106 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 DEFB108BQ8NET1 73 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 C22orf15Q8WYQ4 148 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 NEUROG1Q92886 237 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 ADTRPQ96IZ2 230 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 EAF1Q96JC9 268 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 NCOR1P1Q9H4R4 102 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 A8MXE2 369 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 J3QR06 171 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 C11orf42Q8N5U0 333 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 CORO2AQ92828 525 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 C9JCJ5 164 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 PSG5Q15238 335 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 ZNF474Q6S9Z5 364 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 NAGKQ9UJ70 344 aa12.92□□□□□ -0.34
TSPAN4-211ENST00000468468 ANKRD11Q6UB99 2663 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 ZNF705FA8MVS1 300 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 CEACAM8P31997 349 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 TIMM23BQ5SRD1 257 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 ZNF439Q8NDP4 499 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 ZCCHC14Q8WYQ9 949 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 MRPL18Q9H0U6 180 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 PLEKHA3Q9HB20 300 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 RNF7Q9UBF6 113 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 MAP1BP46821 2468 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 TRAV9-1A0A075B6T8 112 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 SELENOTP62341 195 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 MOB3BQ86TA1 216 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 OR1L6Q8NGR2 347 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 FAM222BQ8WU58 562 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 NABP2Q9BQ15 211 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 SLC45A2Q9UMX9 530 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 LY96Q9Y6Y9 160 aa12.91□□□□□ -0.34
TSPAN4-211ENST00000468468 RP1L1Q8IWN7 2480 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 M0QZK8 103 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 AREGP15514 252 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 CCL13Q99616 98 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 SFXN3Q9BWM7 321 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 FNDC10F2Z333 226 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 MMP23AO75900 390 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 LGALS4P56470 323 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 RPEL1Q2QD12 228 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 TBX15Q96SF7 602 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 GCM1Q9NP62 436 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 SLC25A10Q9UBX3 287 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 TP53TG3Q9ULZ0 132 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 DSCAMO60469 2012 aa12.9□□□□□ -0.34
TSPAN4-211ENST00000468468 APC2O95996 2303 aa12.9□□□□□ -0.35
TSPAN4-211ENST00000468468 IGLV3-9A0A075B6K5 115 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 HELTA6NFD8 242 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 UPK2O00526 184 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 CRISP2P16562 243 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 CRYBB3P26998 211 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 OR10J1P30954 320 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 TNFAIP6P98066 277 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 FOXC1Q12948 553 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 KRTCAP3Q53RY4 240 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 C1orf185Q5T7R7 199 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 STUMQ69YW2 141 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 GAFA1Q96PS6 74 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 GATA2P23769 480 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 GATA4P43694 442 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 IER3P46695 156 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 PRCDQ00LT1 54 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 MMD2Q8IY49 270 aa12.89□□□□□ -0.35
TSPAN4-211ENST00000468468 TMEM167BQ9NRX6 74 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms