RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TRAPPC2BP0DI82 140 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 RPA2P15927 270 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 PI3P19957 117 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 PIGPP57054 158 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 IL18Q14116 193 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 RPEL1Q2QD12 228 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 OR10W1Q8NGF6 305 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 OR6Q1Q8NGQ2 317 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 OR5B3Q8NH48 314 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 MCFD2Q8NI22 146 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 TSC22D3Q99576 134 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 B9D2Q9BPU9 175 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 ELOVL1Q9BW60 279 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 C1orf43Q9BWL3 253 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 RSL24D1Q9UHA3 163 aaKnown RBP8.49□□□□□ -1.05
COL4A6-205ENST00000468338 PRNDQ9UKY0 176 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 NSG2Q9Y328 171 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 ANKRD20A5PA0PJZ0 165 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 FABP12A6NFH5 140 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 C15orf61A6NNL5 157 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 SNAPC5O75971 98 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 REG1AP05451 166 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 PGAM2P15259 253 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 SPNP16150 400 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 UCP1P25874 307 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 SURF2Q15527 256 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-205ENST00000468338 TATDN3Q17R31 274 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 GPHB5Q86YW7 130 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 GDPD1Q8N9F7 314 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 NUDT10Q8NFP7 164 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 OR4C16Q8NGL9 310 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 OR13C8Q8NGS7 320 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 ZFAND1Q8TCF1 268 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 LSM10Q969L4 123 aaKnown RBP8.48□□□□□ -1.05
COL4A6-205ENST00000468338 NUDT11Q96G61 164 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 TP53RKQ96S44 253 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 RTBDNQ9BSG5 229 aaPredicted RBP8.48□□□□□ -1.05
COL4A6-205ENST00000468338 SLC2A8Q9NY64 477 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 FKBP11Q9NYL4 201 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 OR51B2Q9Y5P1 312 aa8.48□□□□□ -1.05
COL4A6-205ENST00000468338 TRBV7-1A0A0A6YYK4 115 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 MFSD2BA6NFX1 497 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 LGALS9O00182 355 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 GGCTO75223 188 aaKnown RBP8.47□□□□□ -1.05
COL4A6-205ENST00000468338 B3GALNT1O75752 331 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 IGKV1-5P01602 117 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 AKAIN1P0CW23 69 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 OR13C7P0DN81 318 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 DEFA4P12838 97 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 GP9P14770 177 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 PPP5CP53041 499 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 MFAP2P55001 183 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 FAAP20Q6NZ36 180 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 ADAMTSL5Q6ZMM2 481 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 H2BFWTQ7Z2G1 175 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 ZNF502Q8TBZ5 544 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 MARCH1Q8TCQ1 289 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 VN1R17PQ8TDU5 208 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 CXorf58Q96LI9 332 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 C5orf66Q9H5L9 145 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 COPZ2Q9P299 210 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 GPR132Q9UNW8 380 aa8.47□□□□□ -1.05
COL4A6-205ENST00000468338 F11RQ9Y624 299 aaKnown RBP8.47□□□□□ -1.05
COL4A6-205ENST00000468338 C3orf85A0A1B0GTC6 90 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 DISC1C4P0D8 188 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 PPP5D1E7EU14 171 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 INS-IGF2F8WCM5 200 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 CDS2O95674 445 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 ETV6P41212 452 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 HSPE1P61604 102 aaKnown RBP8.46□□□□□ -1.06
COL4A6-205ENST00000468338 RAB32Q13637 225 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 SCGB2B2Q4G0G5 96 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 GAGE13Q4V321 117 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 CCDC71LQ8N9Z2 235 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 GLYATL2Q8WU03 294 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 EEF1AKMT3Q96AZ1 226 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 ATP6V0BQ99437 205 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 PRRT1Q99946 306 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 THAP7Q9BT49 309 aaPredicted RBP8.46□□□□□ -1.06
COL4A6-205ENST00000468338 THYN1Q9P016 225 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 V9GYH0 126 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 COL7A1Q02388 2944 aa8.46□□□□□ -1.06
COL4A6-205ENST00000468338 A0A0B4J293 547 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 OR2C1O95371 312 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 HLA-AP01891 365 aaKnown RBP8.45□□□□□ -1.06
COL4A6-205ENST00000468338 CLEC3BP05452 202 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 PRCDQ00LT1 54 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 ZNF79Q15937 498 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 SP6Q3SY56 376 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 AARDQ4LEZ3 155 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 CLEC19AQ6UXS0 136 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 CCDC190Q86UF4 302 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 HAPLN4Q86UW8 402 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 ZNF114Q8NC26 417 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 OR51S1Q8NGJ8 323 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 OR1L6Q8NGR2 347 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms