RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 CTDSPLO15194 276 aa12.91□□□□□ -0.34
SSBP1-207ENST00000468267 PPP5CP53041 499 aa12.91□□□□□ -0.34
SSBP1-207ENST00000468267 SCGB2B2Q4G0G5 96 aa12.91□□□□□ -0.34
SSBP1-207ENST00000468267 PLET1Q6UQ28 207 aa12.91□□□□□ -0.34
SSBP1-207ENST00000468267 OR1L6Q8NGR2 347 aa12.91□□□□□ -0.34
SSBP1-207ENST00000468267 OR13C8Q8NGS7 320 aa12.91□□□□□ -0.34
SSBP1-207ENST00000468267 TP53RKQ96S44 253 aa12.91□□□□□ -0.34
SSBP1-207ENST00000468267 C3orf85A0A1B0GTC6 90 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 TGOLN2O43493 480 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.34
SSBP1-207ENST00000468267 HSPE1P61604 102 aaKnown RBP12.9□□□□□ -0.34
SSBP1-207ENST00000468267 IL18Q14116 193 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 MEF2DQ14814 521 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 OR1P1Q8NH06 330 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 CACNG8Q8WXS5 425 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 ISOC1Q96CN7 298 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 RCHY1Q96PM5 261 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 ATP6V0BQ99437 205 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
SSBP1-207ENST00000468267 ZMAT4Q9H898 229 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 PALMDQ9NP74 551 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 COPZ2Q9P299 210 aa12.9□□□□□ -0.34
SSBP1-207ENST00000468267 OR2T8A6NH00 312 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 K7EIM0 57 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 IGKV1-5P01602 117 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 CTSDP07339 412 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-207ENST00000468267 P0C879 139 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 PRCDQ00LT1 54 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 UNQ9165/PRO28630Q6UXU0 137 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 OR2C3Q8N628 320 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 CCDC71LQ8N9Z2 235 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 UXS1Q8NBZ7 420 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 SCARB1Q8WTV0 552 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-207ENST00000468267 TM2D3Q9BRN9 247 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 ZNF436Q9C0F3 470 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-207ENST00000468267 C6orf62Q9GZU0 229 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-207ENST00000468267 TUBA4BQ9H853 241 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 C21orf62Q9NYP8 219 aa12.89□□□□□ -0.35
SSBP1-207ENST00000468267 IGHV3-21A0A0B4J1V1 117 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 IGHV3-35A0A0C4DH35 117 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 ATG12O94817 140 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 AKAIN1P0CW23 69 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-207ENST00000468267 CD81P60033 236 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 SP6Q3SY56 376 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 ZNF57Q68EA5 555 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-207ENST00000468267 FAAP20Q6NZ36 180 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 SOSTQ9BQB4 213 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 NEURL2Q9BR09 285 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
SSBP1-207ENST00000468267 SLC2A8Q9NY64 477 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 MLXQ9UH92 298 aa12.88□□□□□ -0.35
SSBP1-207ENST00000468267 A0A0B4J293 547 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 F8W735 103 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-207ENST00000468267 GSTZ1O43708 216 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-207ENST00000468267 B3GALNT1O75752 331 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 UCP1P25874 307 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 TNFSF8P32971 234 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 GUCA2BQ16661 112 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 ZNF114Q8NC26 417 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 OR4C16Q8NGL9 310 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 MARC2Q969Z3 335 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 WDR89Q96FK6 387 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-207ENST00000468267 RTBDNQ9BSG5 229 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-207ENST00000468267 CHRDL1Q9BU40 450 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
SSBP1-207ENST00000468267 UFC1Q9Y3C8 167 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 CEPT1Q9Y6K0 416 aa12.87□□□□□ -0.35
SSBP1-207ENST00000468267 ANKRD20A5PA0PJZ0 165 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 CD7P09564 240 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 AKR1C2P52895 323 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 ERHP84090 104 aaKnown RBP12.86□□□□□ -0.35
SSBP1-207ENST00000468267 SURF2Q15527 256 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-207ENST00000468267 HAGHQ16775 308 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 TMEM61Q8N0U2 210 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 MCFD2Q8NI22 146 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 TMEM190Q8WZ59 177 aa12.86□□□□□ -0.35
SSBP1-207ENST00000468267 MRPL27Q9P0M9 148 aaKnown RBP12.86□□□□□ -0.35
SSBP1-207ENST00000468267 C14orf166Q9Y224 244 aaKnown RBP12.86□□□□□ -0.35
SSBP1-207ENST00000468267 I3L2K1 104 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 NDUFA4O00483 81 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 ADMP35318 185 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 Q56UQ5 140 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 UBAC2Q8NBM4 344 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 PRRT1Q99946 306 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 TMEM222Q9H0R3 208 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 C5orf66Q9H5L9 145 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 PLEKHA3Q9HB20 300 aa12.85□□□□□ -0.35
SSBP1-207ENST00000468267 GPR132Q9UNW8 380 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms