RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SIP14410 1827 aa7.34□□□□□ -1.23
HPS4-209ENST00000466781 LILRA1O75019 489 aa7.34□□□□□ -1.23
HPS4-209ENST00000466781 NBEAP1P0C6P0 100 aa7.34□□□□□ -1.23
HPS4-209ENST00000466781 RFPL3SP0C7P2 107 aa7.34□□□□□ -1.23
HPS4-209ENST00000466781 IGHV1-2P23083 117 aa7.34□□□□□ -1.23
HPS4-209ENST00000466781 ASPHD2Q6ICH7 369 aa7.34□□□□□ -1.23
HPS4-209ENST00000466781 A0A0G2JMM0 328 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 A0A1W2PPB8 328 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 A0A1W2PRS3 328 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 C17orf100A8MU93 164 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 KIR3DP1A8MWS1 328 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 FAM90A1Q86YD7 464 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 LRTM2Q8N967 370 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 GLMPQ8WWB7 406 aa7.34□□□□□ -1.24
HPS4-209ENST00000466781 PSCAO43653 123 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 MTCL1Q9Y4B5 1905 aaKnown RBP7.33□□□□□ -1.24
HPS4-209ENST00000466781 TRGV11A0A075B6L2 103 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 C1QL1O75973 258 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 IGFBP2P18065 325 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 CMC4P56277 68 aaPredicted RBP7.33□□□□□ -1.24
HPS4-209ENST00000466781 FER1L6-AS1Q8NA97 138 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 RNASEH2CQ8TDP1 164 aaKnown RBP7.33□□□□□ -1.24
HPS4-209ENST00000466781 GGACTQ9BVM4 153 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 NDUFA3O95167 84 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 ST20Q9HBF5 79 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 SAP30O75446 220 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 CD33P20138 364 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 C5orf66Q9H5L9 145 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 APOHP02749 345 aaPredicted RBP7.33□□□□□ -1.24
HPS4-209ENST00000466781 UMODP07911 640 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 ZNF708P17019 499 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 GPX4P36969 197 aaPredicted RBP7.33□□□□□ -1.24
HPS4-209ENST00000466781 OR52E5Q8NH55 327 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 NPCDR1Q9BY65 106 aa7.33□□□□□ -1.24
HPS4-209ENST00000466781 IGHV3OR16-8A0A075B7F1 116 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 TRAV14DV4A0A0A6YYC5 116 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 H0YL77 283 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 CD8AP01732 235 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 HLA-DQB1P01920 261 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
HPS4-209ENST00000466781 SLC50A1Q9BRV3 221 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 PARD6GQ9BYG4 376 aaPredicted RBP7.32□□□□□ -1.24
HPS4-209ENST00000466781 RPP21Q9H633 154 aaKnown RBP7.32□□□□□ -1.24
HPS4-209ENST00000466781 CHCHD2Q9Y6H1 151 aaPredicted RBP7.32□□□□□ -1.24
HPS4-209ENST00000466781 PRR32B1ATL7 298 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 SOD3P08294 240 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 MUC21Q5SSG8 566 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 CYB5R2Q6BCY4 276 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 ATOH7Q8N100 152 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 C11orf44Q8N8P7 122 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 NEUROG1Q92886 237 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 SLC25A28Q96A46 364 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 Q9H3A6 140 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 MUC21A0A0G2JKD1 596 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 MUC21A0A140T8X8 626 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 A0A1B0GW15 77 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 C12orf77C9JDV5 145 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 ASCL4Q6XD76 172 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 C9orf106Q8NAJ2 232 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 PRADC1Q9BSG0 188 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 RLFQ13129 1914 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 MSGN1A6NI15 193 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 ADARB2-AS1A8MUL3 147 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 IQCF6A8MYZ5 107 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 RND3P61587 244 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 WDYHV1Q96HA8 205 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
HPS4-209ENST00000466781 IGKV1D-42A0A075B6H8 117 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 CGAP01215 116 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 WNT2P09544 360 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 TDGF1P3P51864 188 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 CIARTQ8N365 385 aaPredicted RBP7.31□□□□□ -1.24
HPS4-209ENST00000466781 TTC9CQ8N5M4 171 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 PRRC2BQ5JSZ5 2229 aaKnown RBP7.31□□□□□ -1.24
HPS4-209ENST00000466781 GRIFINA4D1Z8 144 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 ERVK11-1P61568 191 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 Q6AWC8 147 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 MRPL14Q6P1L8 145 aaKnown RBP7.31□□□□□ -1.24
HPS4-209ENST00000466781 PSMG3Q9BT73 122 aaPredicted RBP7.31□□□□□ -1.24
HPS4-209ENST00000466781 VCX2Q9H322 139 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 NYNRINQ9P2P1 1898 aaKnown RBP7.31□□□□□ -1.24
HPS4-209ENST00000466781 TRAV40A0A0B4J280 105 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 C2orf68Q2NKX9 166 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 TMEM95Q3KNT9 176 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 OTORQ9NRC9 128 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.31□□□□□ -1.24
HPS4-209ENST00000466781 KLF4O43474 513 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 FAM89BQ8N5H3 189 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 RBM38Q9H0Z9 239 aaKnown RBP7.31□□□□□ -1.24
HPS4-209ENST00000466781 A0A1B0GUT8 65 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 TFF3Q07654 80 aa7.31□□□□□ -1.24
HPS4-209ENST00000466781 NPIPB13A6NJU9 1138 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 PVRIGQ6DKI7 326 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 TET1Q8NFU7 2136 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 TRAV21A0A0B4J279 112 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 CXorf65A6NEN9 183 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 TMEM50AO95807 157 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 ZXDCQ2QGD7 858 aaPredicted RBP7.3□□□□□ -1.24
HPS4-209ENST00000466781 ZNF585BQ52M93 769 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 FAM166AQ6J272 317 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms