RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 MAP1LC3AQ9H492 121 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 EFCAB1Q9HAE3 211 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 SLC39A9Q9NUM3 307 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 RASL12Q9NYN1 266 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 NKIRAS1Q9NYS0 192 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 USE1Q9NZ43 259 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 GMEB1Q9Y692 573 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 EXPH5Q8NEV8 1989 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 HEATR5AQ86XA9 2040 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 TONSLQ96HA7 1378 aa0.31□□□□□ -2.36
CHMP2B-202ENST00000466696 SMIM23A6NLE4 172 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 IQCF5A8MTL0 148 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 LRRN3E7EW58 273 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 PSMD12O00232 456 aaPredicted RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 LST1O00453 97 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 NCR3O14931 201 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 SLC16A4O15374 487 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 COCHO43405 550 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 FADS1O60427 444 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 DNAL4O96015 105 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 IFNA10P01566 189 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 PRM2P04554 102 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 FGF6P10767 208 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 SPI1P17947 270 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST1H2BOP23527 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 S100A4P26447 101 aaKnown RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 RPL12P30050 165 aaKnown RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST1H2BBP33778 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 MAP2K4P45985 399 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST1H2BDP58876 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST1H2BCP62807 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 SUPT4H1P63272 117 aaKnown RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 TPM4P67936 248 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 MED21Q13503 144 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST2H2BEQ16778 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 FAM74A1Q5RGS3 127 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 CLVS2Q5SYC1 327 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 C1orf195Q5TG92 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 AADACL3Q5VUY0 350 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 SPOPLQ6IQ16 392 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 RPL22L1Q6P5R6 122 aaKnown RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 LCN15Q6UWW0 184 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 LRRN1Q6UXK5 716 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 DEFB128Q7Z7B8 93 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 TRAPPC6BQ86SZ2 158 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 CLVS1Q8IUQ0 354 aaPredicted RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 LINC00311Q8N616 119 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 Q8N814 137 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 TMEM161BQ8NDZ6 487 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 C4orf3Q8WVX3 66 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 RASSF5Q8WWW0 418 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST1H2BHQ93079 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 LINC00526Q96FQ7 95 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST1H2BNQ99877 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 HIST1H2BMQ99879 126 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 WDR61Q9GZS3 305 aaKnown RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 C6orf62Q9GZU0 229 aaPredicted RBP0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 PLEKHJ1Q9NW61 149 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 C3orf18Q9UK00 162 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 SLC35A3Q9Y2D2 325 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 COQ4Q9Y3A0 265 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 KIF24Q5T7B8 1368 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 ABCC11Q96J66 1382 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 KIF15Q9NS87 1388 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 RIC1Q4ADV7 1423 aa0.3□□□□□ -2.36
CHMP2B-202ENST00000466696 TRAV1-1A0A0B4J248 108 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 A0A0J9YY10 115 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 A0A1B0GX78 115 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 FABP12A6NFH5 140 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 CCDC160A6NGH7 325 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 H0Y980 276 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 GOLGA6L19H0YKK7 550 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 TRAPPC2LH3BP13 241 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 OR1I1O60431 355 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 NDUFS6O75380 124 aaKnown RBP0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 OR2B3O76000 313 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 DEXIO95424 95 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 KRT75O95678 551 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 CRYZL1O95825 349 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 TCL1BO95988 128 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 BAALC-AS2P0C853 105 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 MGST1P10620 155 aaKnown RBP0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 CD79AP11912 226 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 FKBP2P26885 142 aaKnown RBP0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 MAGEA2P43356 314 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 MARCKSL1P49006 195 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 ZNF80P51504 273 aaPredicted RBP0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 UBE2G2P60604 165 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 RHOBP62745 196 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 HBA1P69905 142 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 RHOGP84095 191 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 ZNF846Q147U1 533 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 RHEBQ15382 184 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 LRRC26Q2I0M4 334 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 KRTAP21-1Q3LI58 79 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 C1orf194Q5T5A4 169 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 GDF5OSQ5U4N7 250 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 PDPK2PQ6A1A2 396 aa0.29□□□□□ -2.36
CHMP2B-202ENST00000466696 TEX261Q6UWH6 196 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms