RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 UBE2CO00762 179 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 RGS13O14921 159 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 SHOXO15266 292 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 MPPED1O15442 326 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 SSX5O60225 188 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 OR2J3O76001 311 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 GIPP09681 153 aaPredicted RBP10.7□□□□□ -0.7
CXCR4-203ENST00000466288 SCTP09683 121 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 GSTT2P0CG29 244 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 TAS2R31P59538 309 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 RAP2BP61225 183 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 SURF2Q15527 256 aaPredicted RBP10.7□□□□□ -0.7
CXCR4-203ENST00000466288 TNXAQ16473 311 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 PRSS8Q16651 343 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 FAM209BQ5JX69 171 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 UXS1Q8NBZ7 420 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 OR11H7Q8NGC8 314 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 ZFAND1Q8TCF1 268 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 ARHGAP5-AS1Q96IT6 56 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 NICN1Q9BSH3 213 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 HDHD3Q9BSH5 251 aaPredicted RBP10.7□□□□□ -0.7
CXCR4-203ENST00000466288 FLVCR2Q9UPI3 526 aa10.7□□□□□ -0.7
CXCR4-203ENST00000466288 IGKV1-6A0A0C4DH72 117 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 A8MWP6 167 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 RLN1P04808 185 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 C4BPBP20851 252 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 NDUFA5Q16718 116 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 LPCAT3Q6P1A2 487 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 BTNL8Q6UX41 500 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 TTC9CQ8N5M4 171 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.69□□□□□ -0.7
CXCR4-203ENST00000466288 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 ZNF431Q8TF32 576 aaPredicted RBP10.69□□□□□ -0.7
CXCR4-203ENST00000466288 OR2A7Q96R45 310 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 ZNF436Q9C0F3 470 aaPredicted RBP10.69□□□□□ -0.7
CXCR4-203ENST00000466288 RIMS4Q9H426 269 aaPredicted RBP10.69□□□□□ -0.7
CXCR4-203ENST00000466288 PLEKHJ1Q9NW61 149 aa10.69□□□□□ -0.7
CXCR4-203ENST00000466288 KIR2DL5BA0A0G2JN68 375 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 KIR2DL5BA0A0G2JPC4 375 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 MEIS3P1A6NDR6 274 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 UBE2KP61086 200 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 FAAP20Q6NZ36 180 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 SLC25A42Q86VD7 318 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 KIR2DL5AQ8N109 375 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 TEX45Q8NA69 505 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 OR5H2Q8NGV7 314 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 KIR2DL5BQ8NHK3 375 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 TERB2Q8NHR7 220 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 C5orf30Q96GV9 206 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 KRTAP4-5Q9BYR2 181 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 SDHAF2Q9NX18 166 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 RDH8Q9NYR8 311 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 TRAV25A0A0B4J276 109 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 FABP7O15540 132 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 ANXA7P20073 488 aaKnown RBP10.68□□□□□ -0.7
CXCR4-203ENST00000466288 HRH1P35367 487 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 LINC00336Q6ZUF6 198 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 STPG3Q8N7X2 389 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 OR5AP2Q8NGF4 316 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 OR1L6Q8NGR2 347 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 OR13C8Q8NGS7 320 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 Q9N2K0 584 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 AK3Q9UIJ7 227 aa10.68□□□□□ -0.7
CXCR4-203ENST00000466288 ZNF320A2RRD8 509 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 M0QYG6 137 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 OR4E1P0C645 316 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 CTRB1P17538 263 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 HLA-GP17693 338 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 NANOS2P60321 138 aaKnown RBP10.67□□□□□ -0.7
CXCR4-203ENST00000466288 TAGLNQ01995 201 aaKnown RBP10.67□□□□□ -0.7
CXCR4-203ENST00000466288 VMA21Q3ZAQ7 101 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 FAM106AQ4KMX7 169 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 C4orf46Q504U0 113 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 CTRB2Q6GPI1 263 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 C19orf35Q6ZS72 473 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 BEST4Q8NFU0 473 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 SPIN2AQ99865 258 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 SPIN2BQ9BPZ2 258 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 MGAT4CQ9UBM8 478 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 UBQLN2Q9UHD9 624 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 MGAT4AQ9UM21 535 aa10.67□□□□□ -0.7
CXCR4-203ENST00000466288 C8orf88P0DMB2 117 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 ARL3P36405 182 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 RTL8BQ17RB0 113 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 SCGB2B2Q4G0G5 96 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 C10orf55Q5SWW7 151 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 OR4A47Q6IF82 309 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 CLEC19AQ6UXS0 136 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
CXCR4-203ENST00000466288 Q6ZS49 121 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 GVQW1Q8N7I0 195 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 SEC22CQ9BRL7 303 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 OR2D2Q9H210 308 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 ZNF430Q9H8G1 570 aaPredicted RBP10.66□□□□□ -0.7
CXCR4-203ENST00000466288 FBXL7Q9UJT9 491 aa10.66□□□□□ -0.7
CXCR4-203ENST00000466288 ELF5Q9UKW6 265 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms