RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 OR51B2Q9Y5P1 312 aa10.05□□□□□ -0.8
CHD3-207ENST00000466233 KRASP01116 189 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 RLN1P04808 185 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 CTSGP08311 255 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 PRSS3P35030 304 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 ADMP35318 185 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 LPAR6P43657 344 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 RFX2P48378 723 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 UCP3P55916 312 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 ODF3L2Q3SX64 289 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 CEMP1Q6PRD7 247 aaPredicted RBP10.04□□□□□ -0.8
CHD3-207ENST00000466233 LYG2Q86SG7 212 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 SCPEP1Q9HB40 452 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
CHD3-207ENST00000466233 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
CHD3-207ENST00000466233 C15orf61A6NNL5 157 aa10.03□□□□□ -0.8
CHD3-207ENST00000466233 INS-IGF2F8WCM5 200 aa10.03□□□□□ -0.8
CHD3-207ENST00000466233 NUPL2O15504 423 aaKnown RBP10.03□□□□□ -0.8
CHD3-207ENST00000466233 MFAP2P55001 183 aa10.03□□□□□ -0.8
CHD3-207ENST00000466233 TAS2R20P59543 309 aa10.03□□□□□ -0.8
CHD3-207ENST00000466233 GATAD1Q8WUU5 269 aa10.03□□□□□ -0.8
CHD3-207ENST00000466233 CHRDL1Q9BU40 450 aa10.03□□□□□ -0.8
CHD3-207ENST00000466233 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
CHD3-207ENST00000466233 EPPK1P58107 5090 aaKnown RBP10.03□□□□□ -0.8
CHD3-207ENST00000466233 IGHV3-35A0A0C4DH35 117 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 CXorf65A6NEN9 183 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 RPA2P15927 270 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 G6PCP35575 357 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 RPS19P39019 145 aaKnown RBP10.02□□□□□ -0.81
CHD3-207ENST00000466233 MFAP4P55083 255 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 NEDD8Q15843 81 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 LYSMD2Q8IV50 215 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 GPX8Q8TED1 209 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 BIRC6Q9NR09 4857 aa10.02□□□□□ -0.81
CHD3-207ENST00000466233 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 IGHV7-4-1A0A0J9YVY3 117 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 SMIM31A0A1B0GVY4 71 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 I3L2K1 104 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 CHEK1O14757 476 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 APOA1P02647 267 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 PMP2P02689 132 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 HRH1P35367 487 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 Q56UQ5 140 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 SAMD12Q8N8I0 201 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 TMEM116Q8NCL8 245 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 SLC25A46Q96AG3 418 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 YIPF6Q96EC8 236 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 SEC22AQ96IW7 307 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 C20orf24Q9BUV8 137 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 NXF2Q9GZY0 626 aaKnown RBP10.01□□□□□ -0.81
CHD3-207ENST00000466233 VCX3AQ9NNX9 186 aa10.01□□□□□ -0.81
CHD3-207ENST00000466233 TRAV14DV4A0A0A6YYC5 116 aa10□□□□□ -0.81
CHD3-207ENST00000466233 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
CHD3-207ENST00000466233 DFFBO76075 338 aa10□□□□□ -0.81
CHD3-207ENST00000466233 CTSDP07339 412 aaPredicted RBP10□□□□□ -0.81
CHD3-207ENST00000466233 HSPE1P61604 102 aaKnown RBP10□□□□□ -0.81
CHD3-207ENST00000466233 TSPAN5P62079 268 aa10□□□□□ -0.81
CHD3-207ENST00000466233 PAFAH1B2P68402 229 aa10□□□□□ -0.81
CHD3-207ENST00000466233 ERHP84090 104 aaKnown RBP10□□□□□ -0.81
CHD3-207ENST00000466233 DEFB135Q30KP9 77 aa10□□□□□ -0.81
CHD3-207ENST00000466233 FAM90A2PQ658T7 463 aa10□□□□□ -0.81
CHD3-207ENST00000466233 H2BFWTQ7Z2G1 175 aa10□□□□□ -0.81
CHD3-207ENST00000466233 OR4A16Q8NH70 328 aa10□□□□□ -0.81
CHD3-207ENST00000466233 ZNF486Q96H40 463 aaPredicted RBP10□□□□□ -0.81
CHD3-207ENST00000466233 GINS3Q9BRX5 216 aa10□□□□□ -0.81
CHD3-207ENST00000466233 RHPN1-AS1Q9BWJ2 59 aa10□□□□□ -0.81
CHD3-207ENST00000466233 HINT2Q9BX68 163 aa10□□□□□ -0.81
CHD3-207ENST00000466233 FXYD6Q9H0Q3 95 aa10□□□□□ -0.81
CHD3-207ENST00000466233 CSTL1Q9H114 145 aa10□□□□□ -0.81
CHD3-207ENST00000466233 MPTX1A8MV57 137 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 FCER2P06734 321 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 RCVRNP35243 200 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 NPBWR1P48145 328 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 TCTAP57738 103 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 RND3P61587 244 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 PVRIGQ6DKI7 326 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 ZNF414Q96IQ9 312 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 RNF2Q99496 336 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 MFFQ9GZY8 342 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 C11orf68Q9H3H3 251 aaKnown RBP9.99□□□□□ -0.81
CHD3-207ENST00000466233 NSG2Q9Y328 171 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 SELENOKQ9Y6D0 94 aa9.99□□□□□ -0.81
CHD3-207ENST00000466233 A0A087WXM4 84 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 CORTO00230 105 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 ATG12O94817 140 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 LY6G6CO95867 125 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 HLA-DMAP28067 261 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 LGALS9CQ6DKI2 356 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 TBC1D26Q86UD7 250 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 UBAC2Q8NBM4 344 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 VSIRQ9H7M9 311 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 UBQLN2Q9UHD9 624 aa9.98□□□□□ -0.81
CHD3-207ENST00000466233 DBX1A6NMT0 343 aa9.97□□□□□ -0.81
CHD3-207ENST00000466233 GNG7O60262 68 aa9.97□□□□□ -0.81
CHD3-207ENST00000466233 B3GALNT1O75752 331 aa9.97□□□□□ -0.81
CHD3-207ENST00000466233 MT-CO2P00403 227 aa9.97□□□□□ -0.81
CHD3-207ENST00000466233 TBPP20226 339 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms