RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 FCGR1BQ92637 280 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 BSCL2Q96G97 398 aaPredicted RBP7.17□□□□□ -1.26
USP39-212ENST00000465514 C20orf24Q9BUV8 137 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 HINT2Q9BX68 163 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 KRTAP4-6Q9BYQ5 205 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 RNF167Q9H6Y7 350 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 DAZ1Q9NQZ3 744 aaKnown RBP7.17□□□□□ -1.26
USP39-212ENST00000465514 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
USP39-212ENST00000465514 IGHV3OR16-8A0A075B7F1 116 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 KIR2DL5BA0A0G2JN68 375 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 KIR2DL5BA0A0G2JPC4 375 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 MEIS3P1A6NDR6 274 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 NDUFA4O00483 81 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 ZNF207O43670 478 aaKnown RBP7.16□□□□□ -1.26
USP39-212ENST00000465514 RPL35AP18077 110 aaKnown RBP7.16□□□□□ -1.26
USP39-212ENST00000465514 GNRHRP30968 328 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 CBX5P45973 191 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 MFAP2P55001 183 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 HERV-K104P61576 105 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 ERVK-16P61578 105 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 ODF3L2Q3SX64 289 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 THOC7Q6I9Y2 204 aaKnown RBP7.16□□□□□ -1.26
USP39-212ENST00000465514 SPSB3Q6PJ21 355 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 HSD17B13Q7Z5P4 300 aaPredicted RBP7.16□□□□□ -1.26
USP39-212ENST00000465514 KIR2DL5AQ8N109 375 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 Q8N1X5 172 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 OR1L8Q8NGR8 309 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 KIR2DL5BQ8NHK3 375 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 C2CD4CQ8TF44 421 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 SCARB1Q8WTV0 552 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 CHRDL1Q9BU40 450 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 DIABLOQ9NR28 239 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 NDUFA4L2Q9NRX3 87 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 C21orf62Q9NYP8 219 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 COMMD9Q9P000 198 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 FBXL17Q9UF56 701 aa7.16□□□□□ -1.26
USP39-212ENST00000465514 LOC100506127A0A0U1RQW1 187 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 OR4C46A6NHA9 309 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 MARCH11A6NNE9 402 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 F8W735 103 aaPredicted RBP7.15□□□□□ -1.26
USP39-212ENST00000465514 K7EMT4 169 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 PGLYRP1O75594 196 aaPredicted RBP7.15□□□□□ -1.26
USP39-212ENST00000465514 KRASP01116 189 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 RLN1P04808 185 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 CTSDP07339 412 aaPredicted RBP7.15□□□□□ -1.26
USP39-212ENST00000465514 F2RP25116 425 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 ADMP35318 185 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 LPAR6P43657 344 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 RFX2P48378 723 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 NANOS2P60321 138 aaKnown RBP7.15□□□□□ -1.26
USP39-212ENST00000465514 DHRS11Q6UWP2 260 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 UBAC2Q8NBM4 344 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 OR5B3Q8NH48 314 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 BORCS5Q969J3 196 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 LSM10Q969L4 123 aaKnown RBP7.15□□□□□ -1.26
USP39-212ENST00000465514 GALNT14Q96FL9 552 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 ATP6V0BQ99437 205 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 MAP6D1Q9H9H5 199 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 IFT46Q9NQC8 304 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 EHFQ9NZC4 300 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 APLNQ9ULZ1 77 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 NSG2Q9Y328 171 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 OR51B2Q9Y5P1 312 aa7.15□□□□□ -1.26
USP39-212ENST00000465514 F11RQ9Y624 299 aaKnown RBP7.15□□□□□ -1.26
USP39-212ENST00000465514 K7EIM0 57 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 SNAPC5O75971 98 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 IFNA4P05014 189 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 CTSGP08311 255 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 FCGR2BP31994 310 aaPredicted RBP7.14□□□□□ -1.27
USP39-212ENST00000465514 G6PCP35575 357 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 TCTAP57738 103 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 RBMY1FQ15415 496 aaKnown RBP7.14□□□□□ -1.27
USP39-212ENST00000465514 RBMS2Q15434 407 aaKnown RBP7.14□□□□□ -1.27
USP39-212ENST00000465514 Q56UQ5 140 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 APRG1Q8IVJ8 170 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 FCAMRQ8WWV6 532 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 DGCR14Q96DF8 476 aaKnown RBP7.14□□□□□ -1.27
USP39-212ENST00000465514 ZNF2Q9BSG1 426 aaPredicted RBP7.14□□□□□ -1.27
USP39-212ENST00000465514 YTHDF1Q9BYJ9 559 aaKnown RBP7.14□□□□□ -1.27
USP39-212ENST00000465514 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 LRP1BQ9NZR2 4599 aa7.14□□□□□ -1.27
USP39-212ENST00000465514 C15orf62A8K5M9 175 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 PMP2P02689 132 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 ZNF124Q15973 351 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 CADM3Q8N126 398 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 TSPAN14Q8NG11 270 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 MOB3AQ96BX8 217 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 S100A16Q96FQ6 103 aaKnown RBP7.13□□□□□ -1.27
USP39-212ENST00000465514 ZNF414Q96IQ9 312 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 TMEM56Q96MV1 263 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 RNF2Q99496 336 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 C6orf62Q9GZU0 229 aaPredicted RBP7.13□□□□□ -1.27
USP39-212ENST00000465514 SCRT2Q9NQ03 307 aa7.13□□□□□ -1.27
USP39-212ENST00000465514 SRRM2Q9UQ35 2752 aaKnown RBP7.13□□□□□ -1.27
USP39-212ENST00000465514 IGHV3-49A0A0A0MS15 119 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 DBX1A6NMT0 343 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 IGLL5B9A064 214 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 M0R2N4 97 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 CHEK1O14757 476 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms