RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 Q8N6K4 173 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 OR4A16Q8NH70 328 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 SCGB1C1Q8TD33 95 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 NARS2Q96I59 477 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 AIFM2Q9BRQ8 373 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 UQCC1Q9NVA1 299 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 NF1P21359 2839 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 SRRM4A7MD48 611 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 HOXA3O43365 443 aaPredicted RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 HRASP01112 189 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 RELBQ01201 579 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 SLC38A11Q08AI6 406 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 ZNF616Q08AN1 781 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 SLC25A24Q6NUK1 477 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 RBMS3Q6XE24 437 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 LILRB2Q8N423 598 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 SSMEM1Q8WWF3 244 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 PINX1Q96BK5 328 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 OR4C12Q96R67 309 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 QTRT1Q9BXR0 403 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 SEC11CQ9BY50 192 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM140Q9NV12 185 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 TCF19Q9Y242 345 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 CARHSP1Q9Y2V2 147 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 CUBNO60494 3623 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 SETD2Q9BYW2 2564 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 A0A1B0GW64 132 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 PMS2P5A8MQ11 134 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 CEBPZOSA8MTT3 80 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 APOC3P02656 99 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM11P17152 192 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 SERF2P84101 59 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 SRSF3P84103 164 aaKnown RBP13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 LY6EQ16553 131 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 OR5R1Q8NH85 324 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 OSR1Q8TAX0 266 aaPredicted RBP13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 FAM213BQ8TBF2 198 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 RNF5Q99942 180 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 TREM1Q9NP99 234 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 TIMM9Q9Y5J7 89 aa13.49□□□□□ -0.25
EXOSC3-203ENST00000465229 A6NDX4 124 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 CNTFRP26992 372 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 LGALS7P47929 136 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 FHITP49789 147 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM219Q86XT9 240 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 VKORC1L1Q8N0U8 176 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 RHOVQ96L33 236 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 HARBI1Q96MB7 349 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 CLCC1Q96S66 551 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 WDR61Q9GZS3 305 aaKnown RBP13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 SMDT1Q9H4I9 107 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 TNFRSF19Q9NS68 423 aa13.48□□□□□ -0.25
EXOSC3-203ENST00000465229 C15orf61A6NNL5 157 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 SCO1O75880 301 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 IFNA17P01571 189 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 IL6RP08887 468 aaPredicted RBP13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 RUNX1Q01196 453 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 VWC2Q2TAL6 325 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 OR10P1Q8NGE3 313 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM147Q9BVK8 224 aa13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 FOXA2Q9Y261 457 aaPredicted RBP13.47□□□□□ -0.25
EXOSC3-203ENST00000465229 AKR1C1Q04828 323 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 PEA15Q15121 130 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 SSX9Q7RTT3 188 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 SVBPQ8N300 66 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM86BQ8N661 226 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 NPBQ8NG41 125 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 ZNF418Q8TF45 676 aaPredicted RBP13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 TAF15Q92804 592 aaKnown RBP eCLIP13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 RBM14Q96PK6 669 aaKnown RBP13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 DUX5Q96PT3 197 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 PBDC1Q9BVG4 233 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 SCRT1Q9BWW7 348 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 ESM1Q9NQ30 184 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM14BQ9NUH8 114 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 PITPNC1Q9UKF7 332 aa13.46□□□□□ -0.25
EXOSC3-203ENST00000465229 TRAV1-1A0A0B4J248 108 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 F8W036 122 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 HBE1P02100 147 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 ADCYAP1P18509 176 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 VDAC2P45880 294 aaPredicted RBP13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 OR2B8PP59922 312 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 PSG5Q15238 335 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 MMDQ15546 238 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 OR4A47Q6IF82 309 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 VPREB3Q9UKI3 123 aa13.46□□□□□ -0.26
EXOSC3-203ENST00000465229 TNCP24821 2201 aa13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 NCBP2LA6PVI3 153 aaKnown RBP13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 C15orf62A8K5M9 175 aa13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 H2AFB1P0C5Y9 115 aa13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 HSPE1P61604 102 aaKnown RBP13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 GUK1Q16774 197 aa13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 OR8G2PQ6IF36 304 aa13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 GGACTQ9BVM4 153 aa13.45□□□□□ -0.26
EXOSC3-203ENST00000465229 PRNDQ9UKY0 176 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms