RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 A0A1W2PN81 502 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 TIMM8AO60220 97 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 PRDX2P32119 198 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 TNXAQ16473 311 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 AARDQ4LEZ3 155 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 SPRNQ5BIV9 151 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 MORN5Q5VZ52 161 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 KIR3DL3Q8N743 410 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 ZNF439Q8NDP4 499 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 LRRC29Q8WV35 223 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 ASCL3Q9NQ33 180 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 TECRQ9NZ01 308 aaKnown RBP10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 AREGP15514 252 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 S100A7P31151 101 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 PRR20EP86478 221 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 PRR20CP86479 221 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 PRR20DP86480 221 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 PRR20BP86481 221 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 PRR20AP86496 221 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 TIGITQ495A1 244 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 Q56UQ5 140 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 IBA57Q5T440 356 aaKnown RBP10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 GDF5OSQ5U4N7 250 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 ST6GALNAC6Q969X2 333 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 SSBP4Q9BWG4 385 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 IFI27L2Q9H2X8 130 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 CHODLQ9H9P2 273 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 IL19Q9UHD0 177 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 GVINP1Q7Z2Y8 2422 aa10.33□□□□□ -0.76
CLCNKA-204ENST00000464764 MT-CO2P00403 227 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 APCSP02743 223 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 TSPOP30536 169 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 GABRA6Q16445 453 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 OR10J3Q5JRS4 329 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 OR4A47Q6IF82 309 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 FAM90A1Q86YD7 464 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 TIMM8BQ9Y5J9 83 aaPredicted RBP10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 ADH4P08319 380 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 USF1P22415 310 aaPredicted RBP10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 CD24P25063 80 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 FAM201AQ5SY85 155 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 ZNRD1Q9P1U0 126 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 PCNX2A6NKB5 2137 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 IGKV1D-17A0A075B6S4 117 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 TRBV9A0A0B4J1U6 114 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 AMY1AP04745 511 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 LOXL3P58215 753 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 ATP1A1-AS1Q5TC04 95 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 EBLN2Q6P2I7 272 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 SPATA12Q7Z6I5 190 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 OR52E5Q8NH55 327 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 C18orf32Q8TCD1 76 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 BORCS7Q96B45 105 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 CXXC4Q9H2H0 198 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 PLEKHA3Q9HB20 300 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 ZNF355PQ9NSJ1 428 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 SLC35D1Q9NTN3 355 aa10.32□□□□□ -0.76
CLCNKA-204ENST00000464764 C9orf172C9J069 976 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 RPL8P62917 257 aaKnown RBP10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 WDR73Q6P4I2 378 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 LY96Q9Y6Y9 160 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 SAA2-SAA4A0A096LPE2 208 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 SH2D7A6NKC9 451 aaPredicted RBP10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 C15orf61A6NNL5 157 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 IGHV3-48P01763 117 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 DUSP3P51452 185 aaPredicted RBP10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 RBX1P62877 108 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 RAB31Q13636 194 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 PMCHL1Q16048 86 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 SMIM21Q3B7S5 101 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 HES3Q5TGS1 186 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 LHFPL4Q7Z7J7 247 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 LYG1Q8N1E2 194 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 OSTCQ9NRP0 149 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 DMXL2Q8TDJ6 3036 aa10.31□□□□□ -0.76
CLCNKA-204ENST00000464764 A0A1W2PNU3 283 aaPredicted RBP10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 TNFSF15O95150 251 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 HSPE1P61604 102 aaKnown RBP10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CNEP1R1Q8N9A8 125 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 POLEQ07864 2286 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 SMIM27A0A1W2PRY6 76 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 M0QZ24 198 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CER1O95813 267 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 MT-ND6P03923 174 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CEACAM8P31997 349 aaPredicted RBP10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CAMPP49913 170 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 MFAP2P55001 183 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 STUMQ69YW2 141 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 PRR27Q6MZM9 219 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 DUX4L9Q6RFH8 374 aaPredicted RBP10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 OR2Z1Q8NG97 314 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 ENY2Q9NPA8 101 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 CLCF1Q9UBD9 225 aa10.3□□□□□ -0.76
CLCNKA-204ENST00000464764 KALRNO60229 2985 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms