RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 C7orf65Q6ZTY9 151 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 LRRC25Q8N386 305 aaPredicted RBP1.42□□□□□ -2.18
CLK1-208ENST00000464454 TMEM86BQ8N661 226 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 OR52E6Q96RD3 313 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 MRPL32Q9BYC8 188 aaKnown RBP1.42□□□□□ -2.18
CLK1-208ENST00000464454 TLNRD1Q9H1K6 362 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 UNC13AQ9UPW8 1703 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 MAST2Q6P0Q8 1798 aa1.42□□□□□ -2.18
CLK1-208ENST00000464454 BRWD1Q9NSI6 2320 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 SMARCA4P51532 1647 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 HEATR5AQ86XA9 2040 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 TRBV10-2A0A0K0K1G8 114 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 TMEM114B3SHH9 223 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 TRAPPC2LH3BP13 241 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 PSMD12O00232 456 aaPredicted RBP1.41□□□□□ -2.18
CLK1-208ENST00000464454 ORC5O43913 435 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 FADS1O60427 444 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 HAND1O96004 215 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 PRM2P04554 102 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 IFNA16P05015 189 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 REEP5Q00765 189 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 OR5B17Q8NGF7 314 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 OR2T4Q8NH00 348 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 MRPL30Q8TCC3 161 aaKnown RBP1.41□□□□□ -2.18
CLK1-208ENST00000464454 MBD3L1Q8WWY6 194 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 PRRT1Q99946 306 aa1.41□□□□□ -2.18
CLK1-208ENST00000464454 WDR61Q9GZS3 305 aaKnown RBP1.41□□□□□ -2.18
CLK1-208ENST00000464454 CCDC88CQ9P219 2028 aa1.4□□□□□ -2.18
CLK1-208ENST00000464454 TGIF2-C20orf24A0A0A6YYL0 155 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 FABP5P3A8MUU1 101 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 PSME3P61289 254 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 CCL20P78556 96 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 MRPS25P82663 173 aaKnown RBP1.4□□□□□ -2.19
CLK1-208ENST00000464454 DR1Q01658 176 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 AESQ08117 197 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 SRSF6Q13247 344 aaKnown RBP1.4□□□□□ -2.19
CLK1-208ENST00000464454 ELOBQ15370 118 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 IBA57Q5T440 356 aaKnown RBP1.4□□□□□ -2.19
CLK1-208ENST00000464454 KLK6Q92876 244 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 PPP1R14BQ96C90 147 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 CISHQ9NSE2 258 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 ATPIF1Q9UII2 106 aa1.4□□□□□ -2.19
CLK1-208ENST00000464454 CRPP02741 224 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 FXYD2P54710 66 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 MOGQ16653 247 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 ARHGAP11BQ3KRB8 267 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 C20orf196Q8IYI0 205 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 MCFD2Q8NI22 146 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 CCDC42Q96M95 316 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 PRTFDC1Q9NRG1 225 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.39□□□□□ -2.19
CLK1-208ENST00000464454 CMTM6Q9NX76 183 aa1.39□□□□□ -2.19
CLK1-208ENST00000464454 TRBV6-5A0A0K0K1A5 114 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 SMIM9A6NGZ8 99 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 TMEM238C9JI98 176 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 CHP2O43745 196 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 LYPLA2O95372 231 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HLA-DRB1P01911 266 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 RPS17P08708 135 aaKnown RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 CST2P09228 141 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 OR4E1P0C645 316 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 RPS4Y1P22090 263 aaKnown RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H1TP22492 207 aaPredicted RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H2BOP23527 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H2BBP33778 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 PPP1R2P41236 205 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 OMPP47874 163 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 EIF2B2P49770 351 aaKnown RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 SERPINB9P50453 376 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H2BDP58876 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 SNRPD2P62316 118 aaKnown RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H2BCP62807 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 NNATQ16517 81 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST2H2BEQ16778 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 AADACL3Q5VUY0 350 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 PPP1R2P3Q6NXS1 205 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 RPL22L1Q6P5R6 122 aaKnown RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 RPS19BP1Q86WX3 136 aaKnown RBP1.38□□□□□ -2.19
CLK1-208ENST00000464454 TRAPPC5Q8IUR0 188 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H2BHQ93079 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H2BNQ99877 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 HIST1H2BMQ99879 126 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 DERL1Q9BUN8 251 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 COMMD5Q9GZQ3 224 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 VPS29Q9UBQ0 182 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 SMPXQ9UHP9 88 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 KIF13BQ9NQT8 1826 aa1.38□□□□□ -2.19
CLK1-208ENST00000464454 TRAPPC13A5PLN9 417 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 CLDN24A6NM45 220 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 E5RI56 91 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 SDCBPO00560 298 aaPredicted RBP1.37□□□□□ -2.19
CLK1-208ENST00000464454 OR2B3O76000 313 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 RPSAP08865 295 aaKnown RBP1.37□□□□□ -2.19
CLK1-208ENST00000464454 METTL15P1P0C7V9 234 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 ZNF80P51504 273 aaPredicted RBP1.37□□□□□ -2.19
CLK1-208ENST00000464454 SUPT4H1P63272 117 aaKnown RBP1.37□□□□□ -2.19
CLK1-208ENST00000464454 EDDM3AQ14507 147 aa1.37□□□□□ -2.19
CLK1-208ENST00000464454 TMED2Q15363 201 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms