RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 OR4C12Q96R67 309 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 KCNIP3Q9Y2W7 256 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 F11RQ9Y624 299 aaKnown RBP10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 NDUFB8O95169 186 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 IGKV1-5P01602 117 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 WT1-ASQ06250 92 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 LINC00299Q6ZSB3 139 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 ZNF114Q8NC26 417 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 RRNAD1Q96FB5 475 aaKnown RBP10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 SLC25A21Q9BQT8 299 aaPredicted RBP10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 PEMTQ9UBM1 199 aa10.02□□□□□ -0.81
R3HDM1-213ENST00000463230 NAP1L6A6NFF2 107 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 BMPR1BO00238 502 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 GGCTO75223 188 aaKnown RBP10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 SAP30O75446 220 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 REG1AP05451 166 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 OR5AC1P0C628 307 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 MECP2P51608 486 aaKnown RBP10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 SRPXP78539 464 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 DEFA5Q01523 94 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 OR10W1Q8NGF6 305 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 OR9G4Q8NGQ1 327 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 NSG2Q9Y328 171 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 DNAH3Q8TD57 4116 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 AARDQ4LEZ3 155 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 OR2C3Q8N628 320 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 OR1P1Q8NH06 330 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 HINT2Q9BX68 163 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 ZNF256Q9Y2P7 627 aaPredicted RBP10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 TMEM56-RWDD3S4R434 201 aa10.01□□□□□ -0.81
R3HDM1-213ENST00000463230 K7EIL1 84 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 LGALS9O00182 355 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 TRBV12-3P01733 135 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 ANXA3P12429 323 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 SP6Q3SY56 376 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 RNASE11Q8TAA1 199 aaKnown RBP10□□□□□ -0.81
R3HDM1-213ENST00000463230 CCDC140Q96MF4 163 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 PDCD10Q9BUL8 212 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 PLEKHA3Q9HB20 300 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 DMRT1Q9Y5R6 373 aa10□□□□□ -0.81
R3HDM1-213ENST00000463230 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 INPP1P49441 399 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 ERHP84090 104 aaKnown RBP9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 TRIQKQ629K1 86 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 OR2K2Q8NGT1 345 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 OR52E5Q8NH55 327 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 C7orf50Q9BRJ6 194 aaKnown RBP9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 GAR1Q9NY12 217 aaKnown RBP9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 A0A0B4J293 547 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 ARL3P36405 182 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 SYNJ2BPP57105 145 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 C19orf35Q6ZS72 473 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 SELENOHQ8IZQ5 122 aaKnown RBP9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 TMEM230Q96A57 120 aa9.99□□□□□ -0.81
R3HDM1-213ENST00000463230 TMEM238LA0A1B0GVL6 79 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 DUXBA0A1W2PPF3 345 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 DBX1A6NMT0 343 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 J3QL48 77 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 IGLV1-51P01701 117 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 TMEM187Q14656 261 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 ZNF57Q68EA5 555 aaPredicted RBP9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 SLC25A24Q6NUK1 477 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 SPSB3Q6PJ21 355 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 SLC35G3Q8N808 338 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 PTTG2Q9NZH5 202 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 ST8SIA3O43173 380 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 UBE2MP61081 183 aaKnown RBP9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 FAM106AQ4KMX7 169 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 IL34Q6ZMJ4 242 aa9.98□□□□□ -0.81
R3HDM1-213ENST00000463230 A0A1B0GVG6 124 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 MFSD2BA6NFX1 497 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 CSN3P07498 182 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 FCGR2BP31994 310 aaPredicted RBP9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 SUB1P53999 127 aaKnown RBP eCLIP9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 SPCS3P61009 180 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 RBMS2Q15434 407 aaKnown RBP9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 TMEM128Q5BJH2 165 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 TMEM268Q5VZI3 342 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 CLEC19AQ6UXS0 136 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 LGI3Q8N145 548 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 LHFPL5Q8TAF8 219 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 BSCL2Q96G97 398 aaPredicted RBP9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 TXN2Q99757 166 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 A0A0B4J2A0 478 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 CENPXA8MT69 81 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 A8MWP6 167 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 CORTO00230 105 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 IFNA17P01571 189 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 C21orf62-AS1Q17RA5 79 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 PVRIGQ6DKI7 326 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 ENY2Q9NPA8 101 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 C21orf62Q9NYP8 219 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 SHPKQ9UHJ6 478 aa9.97□□□□□ -0.81
R3HDM1-213ENST00000463230 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms