RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 OSR1Q8TAX0 266 aaPredicted RBP13.27□□□□□ -0.28
SMC4-204ENST00000462787 TMEM160Q9NX00 188 aa13.27□□□□□ -0.28
SMC4-204ENST00000462787 ITGB1BP1O14713 200 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 Q0VG73 95 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 ZNF497Q6ZNH5 498 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 ORMDL3Q8N138 153 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 ZNF837Q96EG3 531 aaPredicted RBP13.27□□□□□ -0.29
SMC4-204ENST00000462787 ITLN1Q8WWA0 313 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 WBP1Q96G27 269 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 LOXL4Q96JB6 756 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 RSPO3Q9BXY4 272 aaPredicted RBP13.27□□□□□ -0.29
SMC4-204ENST00000462787 H3BTX0 84 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 CRYGSP22914 178 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 RTN4RL2Q86UN3 420 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 OR9G4Q8NGQ1 327 aa13.27□□□□□ -0.29
SMC4-204ENST00000462787 TRAV24A0A0B4J272 114 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 OR52E5Q8NH55 327 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 DEPPQ9NTK1 212 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 TYMSP04818 313 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 FCGR2BP31994 310 aaPredicted RBP13.26□□□□□ -0.29
SMC4-204ENST00000462787 DGAT2L7PQ6IED9 249 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 NPSP0C0P6 89 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 AREGP15514 252 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 TM4SF20Q53R12 229 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 LEAP2Q969E1 77 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 TMEM186Q96B77 213 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 SIGLEC12Q96PQ1 595 aa13.26□□□□□ -0.29
SMC4-204ENST00000462787 AKIRIN1Q9H9L7 192 aaPredicted RBP13.26□□□□□ -0.29
SMC4-204ENST00000462787 CSRP2Q16527 193 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 OR13A1Q8NGR1 328 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 RAB1BQ9H0U4 201 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 RAMP3O60896 148 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 Q6ZS49 121 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
SMC4-204ENST00000462787 ARRDC1-AS1Q9H2J1 176 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 H7C2G1 150 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 C18orf15Q96N68 181 aa13.25□□□□□ -0.29
SMC4-204ENST00000462787 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 SLC25A45Q8N413 288 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 LYPD6BQ8NI32 183 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 WNT9BO14905 357 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 MOSP00540 346 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 LGALS3P17931 250 aaKnown RBP13.24□□□□□ -0.29
SMC4-204ENST00000462787 CX3CL1P78423 397 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 TDHQ8IZJ6 230 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 GGTLC1Q9BX51 225 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 TP53BP1Q12888 1972 aaPredicted RBP13.24□□□□□ -0.29
SMC4-204ENST00000462787 MPV17L2Q567V2 206 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 TRBV20OR9-2A0A075B6H5 130 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 C15orf61A6NNL5 157 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 CFHR5Q9BXR6 569 aa13.24□□□□□ -0.29
SMC4-204ENST00000462787 CD5LO43866 347 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 IGKV1-5P01602 117 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 CD33P20138 364 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
SMC4-204ENST00000462787 TPTE2P1Q5T6R2 138 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 RNF144BQ7Z419 303 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 PPIHO43447 177 aaKnown RBP13.23□□□□□ -0.29
SMC4-204ENST00000462787 PNRC2Q9NPJ4 139 aaKnown RBP13.23□□□□□ -0.29
SMC4-204ENST00000462787 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 IGKV1-27A0A075B6S5 117 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 HBDP02042 147 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 MFAP4P55083 255 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 FOXC2Q99958 501 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 UNC13CQ8NB66 2214 aa13.23□□□□□ -0.29
SMC4-204ENST00000462787 SAMD5Q5TGI4 173 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 J3KRW8 73 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 TDGF1P13385 188 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 GATA2P23769 480 aaPredicted RBP13.22□□□□□ -0.29
SMC4-204ENST00000462787 CCDC144NLQ6NUI1 221 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 NHP2Q9NX24 153 aaKnown RBP13.22□□□□□ -0.29
SMC4-204ENST00000462787 A0A1W2PRD5 423 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 A0A1W2PRF3 423 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 A0A1W2PRM7 423 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 SMAGPQ0VAQ4 97 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 NCOR1P1Q9H4R4 102 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 FREM3P0C091 2139 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 A0A1W2PR77 199 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 GAGE12BA1L429 117 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 ESDP10768 282 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 LCN12Q6JVE5 192 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 GFRALQ6UXV0 394 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 FAM169BQ8N8A8 192 aa13.22□□□□□ -0.29
SMC4-204ENST00000462787 ZNF418Q8TF45 676 aaPredicted RBP13.22□□□□□ -0.29
SMC4-204ENST00000462787 PSG1P11464 419 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 Q9H3A6 140 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 GP6Q9HCN6 339 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 FSCN3Q9NQT6 498 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 MAP1BP46821 2468 aaKnown RBP13.21□□□□□ -0.29
SMC4-204ENST00000462787 IGHV3-72A0A0B4J1Y9 119 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 A0A0G2JLM5 398 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 YPEL1O60688 119 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 REG1AP05451 166 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 YPEL2Q96QA6 119 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 OTORQ9NRC9 128 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 TRBV6-6A0A0A6YYG2 114 aa13.21□□□□□ -0.29
SMC4-204ENST00000462787 IGHV3-48P01763 117 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms