RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LGALSLQ3ZCW2 172 aaPredicted RBP5.85□□□□□ -1.47
UBE4B-204ENST00000462658 HCP5Q6MZN7 132 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 PRSS54Q6PEW0 395 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 H2BFWTQ7Z2G1 175 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 TGIF2LXQ8IUE1 241 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 OR4P4Q8NGL7 312 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 OR1S1Q8NH92 325 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 NABP2Q9BQ15 211 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 MRPL20Q9BYC9 149 aaKnown RBP5.85□□□□□ -1.47
UBE4B-204ENST00000462658 MFFQ9GZY8 342 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 SIRPDQ9H106 197 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 PLSCR3Q9NRY6 295 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 SLC35D1Q9NTN3 355 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 ZFP57Q9NU63 452 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 MBD2Q9UBB5 411 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 CACNG5Q9UF02 275 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 LSM5Q9Y4Y9 91 aaKnown RBP5.85□□□□□ -1.47
UBE4B-204ENST00000462658 HSPB11Q9Y547 144 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 INSIG2Q9Y5U4 225 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 POMT1Q9Y6A1 747 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 ITPR3Q14573 2671 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 DNHD1Q96M86 4753 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 A0A1W2PRD5 423 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 A0A1W2PRF3 423 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 A0A1W2PRM7 423 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 ODF3BA8MYP8 253 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 LEUTXA8MZ59 168 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 RNASEK-C17orf49H0YIS7 233 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 H0YJW9 148 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 LY6LH3BQJ8 138 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 H7C2Y5 167 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 K7EPK0 472 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 L7N2F9 121 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 PITX3O75364 302 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 DEDDO75618 318 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 HRASP01112 189 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 P0C879 139 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 MMP9P14780 707 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 NQO2P16083 231 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 CXCL2P19875 107 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 HTR1DP28221 377 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 MC5RP33032 325 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 NUP62P37198 522 aaPredicted RBP5.84□□□□□ -1.47
UBE4B-204ENST00000462658 NKX2-1P43699 371 aaPredicted RBP5.84□□□□□ -1.47
UBE4B-204ENST00000462658 ERVK-16P61578 105 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 PAX8Q06710 450 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 DHRS7BQ6IAN0 325 aaPredicted RBP5.84□□□□□ -1.47
UBE4B-204ENST00000462658 SSX9Q7RTT3 188 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 PDZD9Q8IXQ8 264 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 FAM71E2Q8N5Q1 922 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 DMBX1Q8NFW5 382 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 DCUN1D4Q92564 292 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 LHX4Q969G2 390 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 RPEQ96AT9 228 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 TBX15Q96SF7 602 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.84□□□□□ -1.47
UBE4B-204ENST00000462658 COA4Q9NYJ1 87 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 OR5AC2Q9NZP5 309 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 DPM3Q9P2X0 92 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 TNFSF18Q9UNG2 199 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 ARID1AO14497 2285 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 DOCK11Q5JSL3 2073 aa5.84□□□□□ -1.47
UBE4B-204ENST00000462658 SVEP1Q4LDE5 3571 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 MTORP42345 2549 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 CUBNO60494 3623 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 IGHV1-3A0A0C4DH29 117 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 B4DSR2 109 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 E5RGE8 158 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 WRBO00258 174 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 TXNL1O43396 289 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 IGKV1-16P04430 117 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 MSMBP08118 114 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 OR9G9P0C7N8 305 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 PVALBP20472 110 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 C4BPBP20851 252 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 CEACAM3P40198 252 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 UBE2E1P51965 193 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 ARHGDIBP52566 201 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 AP2S1P53680 142 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 POLR2GP62487 172 aaKnown RBP eCLIP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 LOXL1Q08397 574 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 TPTE2P1Q5T6R2 138 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 ACOT7LQ6ZUV0 252 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 TMUB2Q71RG4 321 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 LHFPL4Q7Z7J7 247 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 MOB3BQ86TA1 216 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 PDPNQ86YL7 162 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 VKORC1L1Q8N0U8 176 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 INO80EQ8NBZ0 244 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 FLYWCH2Q96CP2 140 aaKnown RBP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 RBMXL1Q96E39 390 aaKnown RBP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 MAGT1Q9H0U3 335 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 RCL1Q9Y2P8 373 aaKnown RBP5.83□□□□□ -1.48
UBE4B-204ENST00000462658 NSG2Q9Y328 171 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 WASHC3Q9Y3C0 194 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 ARHGAP32A7KAX9 2087 aa5.83□□□□□ -1.48
UBE4B-204ENST00000462658 ZANQ9Y493 2812 aa5.82□□□□□ -1.48
UBE4B-204ENST00000462658 A0A096LNT2 108 aa5.82□□□□□ -1.48
UBE4B-204ENST00000462658 IGHV3-72A0A0B4J1Y9 119 aa5.82□□□□□ -1.48
UBE4B-204ENST00000462658 A0A0D9SG52 128 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms