RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 GPR146Q96CH1 333 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 CIB3Q96Q77 187 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-206ENST00000462613 GPR61Q9BZJ8 451 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 RANGRFQ9HD47 186 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-206ENST00000462613 GAR1Q9NY12 217 aaKnown RBP4.98□□□□□ -1.61
SF3B1-206ENST00000462613 FBXL7Q9UJT9 491 aa4.98□□□□□ -1.61
SF3B1-206ENST00000462613 TRBV7-1A0A0A6YYK4 115 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 A0A0B4J293 547 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 RPS10-NUDT3A0A1W2PQS6 291 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 IGLC7A0M8Q6 106 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 C5orf51A6NDU8 294 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 SNRPGP15A8MWD9 76 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 FAM25EA8MYX2 175 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 CCL24O00175 119 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 SOX15O60248 233 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 OR2J3O76001 311 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 IFNA10P01566 189 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 HSPB1P04792 205 aaKnown RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 IL5P05113 134 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 LGALS1P09382 135 aaKnown RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 P0C879 139 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 MYOD1P15172 320 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 HTR2BP41595 481 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 NKX2-1P43699 371 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 ATP5IP56385 69 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 KRTAP10-3P60369 221 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 RUNX1Q01196 453 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 TNFRSF9Q07011 255 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 ZNF616Q08AN1 781 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 EXOSC2Q13868 293 aaKnown RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 TATDN3Q17R31 274 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 IZUMO4Q1ZYL8 232 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 RGS21Q2M5E4 152 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 C15orf32Q32M92 178 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 ANKRD55Q3KP44 614 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 NMSQ5H8A3 153 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 TCTEX1D4Q5JR98 221 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 PRR31Q5SQ13 230 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 ASPHD1Q5U4P2 390 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 GGNBP1Q5YKI7 109 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 TREML4Q6UXN2 200 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 GSG1LQ6UXU4 331 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 C8orf86Q6ZUL3 223 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 C12orf45Q8N5I9 185 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 OR2C3Q8N628 320 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 ZNF114Q8NC26 417 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 OR11H1Q8NG94 326 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 OR10W1Q8NGF6 305 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 OR1P1Q8NH06 330 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 MYOZ3Q8TDC0 251 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 MITD1Q8WV92 249 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 MCRIP2Q9BUT9 160 aaKnown RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 KLK15Q9H2R5 256 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 PRR13Q9NZ81 148 aa4.97□□□□□ -1.61
SF3B1-206ENST00000462613 PEF1Q9UBV8 284 aaKnown RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 F11RQ9Y624 299 aaKnown RBP4.97□□□□□ -1.61
SF3B1-206ENST00000462613 IGLV11-55A0A075B6I3 123 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 TRBV9A0A0B4J1U6 114 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 A0A0G2JRQ6 117 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 E7EUB6 86 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 INS-IGF2F8WCM5 200 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 LINC01619G3V211 115 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 SSNA1O43805 119 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 NXPH3O95157 252 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 TSPAN15O95858 294 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 IGHV3-11P01762 117 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 PRH1P02810 166 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 PVALBP20472 110 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-206ENST00000462613 RAB11AP62491 216 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 IFITM3Q01628 133 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 WT1-ASQ06250 92 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 RPEL1Q2QD12 228 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 IAH1Q2TAA2 248 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-206ENST00000462613 AARDQ4LEZ3 155 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 PDLIM3Q53GG5 364 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-206ENST00000462613 ETFRF1Q6IPR1 90 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 SLC24A4Q8NFF2 622 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 OR52B4Q8NGK2 314 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 OR1N2Q8NGR9 330 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 VN1R17PQ8TDU5 208 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 DTD1Q8TEA8 209 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 PINX1Q96BK5 328 aaKnown RBP4.96□□□□□ -1.62
SF3B1-206ENST00000462613 MISP3Q96FF7 219 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 OR5B12Q96R08 314 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 SEC22CQ9BRL7 303 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 MARVELD1Q9BSK0 173 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 GNB4Q9HAV0 340 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 GSKIPQ9P0R6 139 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 HSPB7Q9UBY9 170 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 ZMAT5Q9UDW3 170 aaKnown RBP4.96□□□□□ -1.62
SF3B1-206ENST00000462613 U3KQ87 197 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 TENM1Q9UKZ4 2725 aa4.96□□□□□ -1.62
SF3B1-206ENST00000462613 A0A1B0GW64 132 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 ANKRD34BA5PLL1 514 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 CGB1A6NKQ9 187 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 DBX1A6NMT0 343 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 ADARB2-AS1A8MUL3 147 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 I3L521 148 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 L7N2F9 121 aa4.95□□□□□ -1.62
SF3B1-206ENST00000462613 SYNGR2O43760 224 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms