RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 NSG2Q9Y328 171 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 F11RQ9Y624 299 aaKnown RBP6.87□□□□□ -1.31
DDX39B-216ENST00000462421 U3KQK5 164 aa6.87□□□□□ -1.31
DDX39B-216ENST00000462421 RPS10-NUDT3A0A1W2PQS6 291 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 CENPXA8MT69 81 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 CEBPZOSA8MTT3 80 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 LGALS9O00182 355 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 BMPR1BO00238 502 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 CTDSP2O14595 271 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 TGOLN2O43493 480 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 GNG7O60262 68 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 YIF1AO95070 293 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 OR2C1O95371 312 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 IGLV1-51P01701 117 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 CD74P04233 296 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 CLEC3BP05452 202 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 PI3P19957 117 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 NPBWR1P48145 328 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 MFAP4P55083 255 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 CD81P60033 236 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 HSPE1P61604 102 aaKnown RBP6.86□□□□□ -1.31
DDX39B-216ENST00000462421 GPHB5Q86YW7 130 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 OR1P1Q8NH06 330 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 MARCH1Q8TCQ1 289 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 DYNC2LI1Q8TCX1 351 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 ABHD1Q96SE0 405 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 GINS3Q9BRX5 216 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 C20orf24Q9BUV8 137 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 NDUFA4L2Q9NRX3 87 aa6.86□□□□□ -1.31
DDX39B-216ENST00000462421 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 TRAV3A0A0B4J244 114 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 IGLC7A0M8Q6 106 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 OR2T8A6NH00 312 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 NDUFB8O95169 186 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 TRBV12-3P01733 135 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 PRCDQ00LT1 54 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 ZNF45Q02386 682 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 DUSP18Q8NEJ0 188 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 OR10W1Q8NGF6 305 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 OR52B4Q8NGK2 314 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 DEDD2Q8WXF8 326 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 RBPMSQ93062 196 aaKnown RBP6.85□□□□□ -1.31
DDX39B-216ENST00000462421 WWC2-AS2Q96NR7 200 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 ATP6V0BQ99437 205 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 ASCL2Q99929 193 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 THAP7Q9BT49 309 aaPredicted RBP6.85□□□□□ -1.31
DDX39B-216ENST00000462421 NAA60Q9H7X0 242 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 ZC4H2Q9NQZ6 224 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.85□□□□□ -1.31
DDX39B-216ENST00000462421 TMEM14BQ9NUH8 114 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 NDUFA13Q9P0J0 144 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 S4R3C0 116 aa6.85□□□□□ -1.31
DDX39B-216ENST00000462421 NOTCH3Q9UM47 2321 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 MFSD2BA6NFX1 497 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 C2orf70A6NJV1 201 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 ZNF701M0R085 212 aaPredicted RBP6.84□□□□□ -1.31
DDX39B-216ENST00000462421 GSTZ1O43708 216 aaPredicted RBP6.84□□□□□ -1.31
DDX39B-216ENST00000462421 HLA-AP01891 365 aaKnown RBP6.84□□□□□ -1.31
DDX39B-216ENST00000462421 FOLR2P14207 255 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 AKR1C4P17516 323 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 OPRK1P41145 380 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 ELLP55199 621 aaPredicted RBP6.84□□□□□ -1.31
DDX39B-216ENST00000462421 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 MRGPRG-AS1Q2M3A8 158 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 ZNF585BQ52M93 769 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 TMEM268Q5VZI3 342 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 ETFRF1Q6IPR1 90 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 TMED4Q7Z7H5 227 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 HAPLN4Q86UW8 402 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 OR51S1Q8NGJ8 323 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 OR4C16Q8NGL9 310 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 SEC22AQ96IW7 307 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 TXN2Q99757 166 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 MIXL1Q9H2W2 232 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 TMEM231Q9H6L2 316 aa6.84□□□□□ -1.31
DDX39B-216ENST00000462421 HEYLQ9NQ87 328 aaPredicted RBP6.84□□□□□ -1.31
DDX39B-216ENST00000462421 DAZ1Q9NQZ3 744 aaKnown RBP6.84□□□□□ -1.31
DDX39B-216ENST00000462421 MRPL27Q9P0M9 148 aaKnown RBP6.84□□□□□ -1.31
DDX39B-216ENST00000462421 IGHV3-21A0A0B4J1V1 117 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 ANKRD20A5PA0PJZ0 165 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 NDUFA4O00483 81 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 CD5P06127 495 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 CSN3P07498 182 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 OR5AC1P0C628 307 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 FRMD6-AS1P0C7T7 363 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 VAMP1P23763 118 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 TNFSF8P32971 234 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 HTR2BP41595 481 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 EIF2B2P49770 351 aaKnown RBP6.83□□□□□ -1.32
DDX39B-216ENST00000462421 SPCS3P61009 180 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 PAFAH1B2P68402 229 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 RPP30P78346 268 aaKnown RBP6.83□□□□□ -1.32
DDX39B-216ENST00000462421 SP6Q3SY56 376 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 FAAP20Q6NZ36 180 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 LHFPL1Q86WI0 220 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 LGI3Q8N145 548 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 OR4D10Q8NGI6 311 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 ZNF502Q8TBZ5 544 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 CCDC140Q96MF4 163 aa6.83□□□□□ -1.32
DDX39B-216ENST00000462421 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms