RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 FCAMRQ8WWV6 532 aa8.4□□□□□ -1.06
LSG1-204ENST00000460584 TMEM56Q96MV1 263 aa8.4□□□□□ -1.06
LSG1-204ENST00000460584 TSC22D3Q99576 134 aa8.4□□□□□ -1.06
LSG1-204ENST00000460584 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
LSG1-204ENST00000460584 RNF167Q9H6Y7 350 aa8.4□□□□□ -1.06
LSG1-204ENST00000460584 OR51B2Q9Y5P1 312 aa8.4□□□□□ -1.06
LSG1-204ENST00000460584 IGHV7-4-1A0A0J9YVY3 117 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 C15orf61A6NNL5 157 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 I3L2K1 104 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 CHEK1O14757 476 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 CTSDP07339 412 aaPredicted RBP8.39□□□□□ -1.07
LSG1-204ENST00000460584 LPAR6P43657 344 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 HERV-K104P61576 105 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
LSG1-204ENST00000460584 PMS2P11Q13670 270 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 PVRIGQ6DKI7 326 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 TMEM17Q86X19 198 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 CMTM1Q8IZ96 169 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 S100A16Q96FQ6 103 aaKnown RBP8.39□□□□□ -1.07
LSG1-204ENST00000460584 CSTL1Q9H114 145 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 UBQLN2Q9UHD9 624 aa8.39□□□□□ -1.07
LSG1-204ENST00000460584 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 INS-IGF2F8WCM5 200 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 GPR31O00270 319 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 SNAPC5O75971 98 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 KRASP01116 189 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 RLN1P04808 185 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 RPA2P15927 270 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 TCTAP57738 103 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 TAS2R46P59540 309 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 MXD1Q05195 221 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
LSG1-204ENST00000460584 SEC22AQ96IW7 307 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 RNF2Q99496 336 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 ZNF2Q9BSG1 426 aaPredicted RBP8.38□□□□□ -1.07
LSG1-204ENST00000460584 RHPN1-AS1Q9BWJ2 59 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
LSG1-204ENST00000460584 NXF2Q9GZY0 626 aaKnown RBP8.38□□□□□ -1.07
LSG1-204ENST00000460584 FXYD6Q9H0Q3 95 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 Q9H521 79 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 EHFQ9NZC4 300 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 VPS13DQ5THJ4 4388 aa8.38□□□□□ -1.07
LSG1-204ENST00000460584 DBX1A6NMT0 343 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 MPTX1A8MV57 137 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 NUPL2O15504 423 aaKnown RBP8.37□□□□□ -1.07
LSG1-204ENST00000460584 G6PCP35575 357 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 RFX2P48378 723 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 UCP3P55916 312 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 UBE2NLQ5JXB2 153 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 LPCAT3Q6P1A2 487 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 LYSMD2Q8IV50 215 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 TMEM116Q8NCL8 245 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 OR6F1Q8NGZ6 308 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 MFFQ9GZY8 342 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 VSIRQ9H7M9 311 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 IFT46Q9NQC8 304 aa8.37□□□□□ -1.07
LSG1-204ENST00000460584 TRAV14DV4A0A0A6YYC5 116 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 LOC100506127A0A0U1RQW1 187 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 DFFBO76075 338 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 MFAP4P55083 255 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 TAS2R20P59543 309 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 KCTD21Q4G0X4 260 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 Q56UQ5 140 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 OR5H2Q8NGV7 314 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 GPX8Q8TED1 209 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 CMTM3Q96MX0 182 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 C20orf24Q9BUV8 137 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 NSG2Q9Y328 171 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 HERC2O95714 4834 aa8.36□□□□□ -1.07
LSG1-204ENST00000460584 IGHV3-21A0A0B4J1V1 117 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 RPL35AP18077 110 aaKnown RBP8.35□□□□□ -1.07
LSG1-204ENST00000460584 PRSS3P35030 304 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
LSG1-204ENST00000460584 APRG1Q8IVJ8 170 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 RPP25LQ8N5L8 163 aaKnown RBP8.35□□□□□ -1.07
LSG1-204ENST00000460584 RARRES2Q99969 163 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 KRTAP17-1Q9BYP8 105 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 HRH4Q9H3N8 390 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 SCPEP1Q9HB40 452 aa8.35□□□□□ -1.07
LSG1-204ENST00000460584 MEIS3P1A6NDR6 274 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 ATP6V1G2O95670 118 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 MT-CO2P00403 227 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 PMP2P02689 132 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 FCER2P06734 321 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 P0C879 139 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 HRH1P35367 487 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 RPS19P39019 145 aaKnown RBP8.34□□□□□ -1.07
LSG1-204ENST00000460584 PAFAH1B2P68402 229 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 TMEM69Q5SWH9 247 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 UBAC2Q8NBM4 344 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 SLC25A46Q96AG3 418 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 GINS3Q9BRX5 216 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 HINT2Q9BX68 163 aa8.34□□□□□ -1.07
LSG1-204ENST00000460584 IGHV3OR16-8A0A075B7F1 116 aa8.33□□□□□ -1.08
LSG1-204ENST00000460584 ZNF207O43670 478 aaKnown RBP8.33□□□□□ -1.08
LSG1-204ENST00000460584 S100GP29377 79 aa8.33□□□□□ -1.08
LSG1-204ENST00000460584 NPBWR1P48145 328 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms