RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TRAV38-1A0A0B4J264 116 aa12.76□□□□□ -0.37
LMNB1-203ENST00000460265 C17orf112F2Z3M2 114 aa12.76□□□□□ -0.37
LMNB1-203ENST00000460265 GCM1Q9NP62 436 aa12.76□□□□□ -0.37
LMNB1-203ENST00000460265 KITLGP21583 273 aa12.76□□□□□ -0.37
LMNB1-203ENST00000460265 CD40P25942 277 aa12.76□□□□□ -0.37
LMNB1-203ENST00000460265 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
LMNB1-203ENST00000460265 FAM90A27PA6NNH2 459 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.75□□□□□ -0.37
LMNB1-203ENST00000460265 TM4SF5O14894 197 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 PAGE4O60829 102 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 IGLV2-14P01704 120 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 LCN2P80188 198 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 SP5Q6BEB4 398 aaPredicted RBP12.75□□□□□ -0.37
LMNB1-203ENST00000460265 OR2D3Q8NGH3 330 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 SAP30LQ9HAJ7 183 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 SLC45A2Q9UMX9 530 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 APELAP0DMC3 54 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 MORN2Q502X0 79 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 RBMXL3Q8N7X1 1067 aaKnown RBP12.75□□□□□ -0.37
LMNB1-203ENST00000460265 SGMS2Q8NHU3 365 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 PXMP4Q9Y6I8 212 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 TYMSP04818 313 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 GCSAMLQ5JQS6 135 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 MBD3L1Q8WWY6 194 aa12.75□□□□□ -0.37
LMNB1-203ENST00000460265 PIEZO1Q92508 2521 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 TRAV3A0A0B4J244 114 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 SRRM5B3KS81 715 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 OR9G9P0C7N8 305 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 LRRC75BQ2VPJ9 315 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 C22orf34Q6ZV56 151 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 OR10X1Q8NGY0 326 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 LRFN3Q9BTN0 628 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 CSTL1Q9H114 145 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 TNFRSF1AP19438 455 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 RPL31P62899 125 aaKnown RBP12.74□□□□□ -0.37
LMNB1-203ENST00000460265 TCF15Q12870 199 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 PRR30Q53SZ7 412 aaPredicted RBP12.74□□□□□ -0.37
LMNB1-203ENST00000460265 LINC01551Q86U37 167 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 RNF2Q99496 336 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 SCNM1Q9BWG6 230 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 HSPB7Q9UBY9 170 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 MBD3L4A6NDZ8 208 aaPredicted RBP12.74□□□□□ -0.37
LMNB1-203ENST00000460265 MBD3L3A6NE82 208 aaPredicted RBP12.74□□□□□ -0.37
LMNB1-203ENST00000460265 MBD3L5A6NJ08 208 aaPredicted RBP12.74□□□□□ -0.37
LMNB1-203ENST00000460265 IGHV3-48P01763 117 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 MYOD1P15172 320 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 Q6ZS92 163 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 MBD3L2Q8NHZ7 208 aaPredicted RBP12.74□□□□□ -0.37
LMNB1-203ENST00000460265 SLC35D1Q9NTN3 355 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 TMEM140Q9NV12 185 aa12.74□□□□□ -0.37
LMNB1-203ENST00000460265 PPBPP02775 128 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 CD1BP29016 333 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 SERF2P84101 59 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 HAPLN4Q86UW8 402 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 FAM90A1Q86YD7 464 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 KLHDC1Q8N7A1 406 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 YPEL1O60688 119 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 HYPMO75409 117 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 CDC34P49427 236 aaPredicted RBP12.73□□□□□ -0.37
LMNB1-203ENST00000460265 OCIAD2Q56VL3 154 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 ATOH7Q8N100 152 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 YPEL2Q96QA6 119 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 WNT10AQ9GZT5 417 aa12.73□□□□□ -0.37
LMNB1-203ENST00000460265 CBLN1P23435 193 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 DUTP33316 252 aaKnown RBP12.72□□□□□ -0.37
LMNB1-203ENST00000460265 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 RAB31Q13636 194 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 RPP25LQ8N5L8 163 aaKnown RBP12.72□□□□□ -0.37
LMNB1-203ENST00000460265 SVIPQ8NHG7 77 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 AGMATQ9BSE5 352 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 SEPSECSQ9HD40 501 aaKnown RBP12.72□□□□□ -0.37
LMNB1-203ENST00000460265 IGHV3-72A0A0B4J1Y9 119 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 RAB29O14966 203 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 CCL3L1P16619 93 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 PMCHP20382 165 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 AMTP48728 403 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
LMNB1-203ENST00000460265 KRTCAP3Q53RY4 240 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 PRR27Q6MZM9 219 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 ODF3L1Q8IXM7 274 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 OR4S2Q8NH73 311 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 RAB9BQ9NP90 201 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 HCFC1P51610 2035 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 TMEM250H0YL14 139 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 IGHV1-46P01743 117 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 ZNF134P52741 427 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 MBNL2Q5VZF2 373 aaKnown RBP12.72□□□□□ -0.37
LMNB1-203ENST00000460265 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 TRAT1Q6PIZ9 186 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 C1orf174Q8IYL3 243 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 FAM57AQ8TBR7 257 aa12.72□□□□□ -0.37
LMNB1-203ENST00000460265 IGHV2-70DA0A0C4DH43 119 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 IGLC2P0DOY2 106 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 IGLC3P0DOY3 106 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 RBPJQ06330 500 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 UTF1Q5T230 341 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 ACSM6Q6P461 480 aa12.71□□□□□ -0.37
LMNB1-203ENST00000460265 DOLPP1Q86YN1 238 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms