RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 CLEC19AQ6UXS0 136 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 CCDC190Q86UF4 302 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 OR51S1Q8NGJ8 323 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 ZNF502Q8TBZ5 544 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 HINT2Q9BX68 163 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 C14orf166Q9Y224 244 aaKnown RBP14.07□□□□□ -0.16
HOXD3-204ENST00000459979 CDS2O95674 445 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 CLEC3BP05452 202 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 ARL3P36405 182 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 ETV6P41212 452 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 MFAP2P55001 183 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 PRCDQ00LT1 54 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 OR1P1Q8NH06 330 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 TMEM222Q9H0R3 208 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 SCP2D1Q9UJQ7 156 aa14.06□□□□□ -0.16
HOXD3-204ENST00000459979 HUWE1Q7Z6Z7 4374 aaKnown RBP14.05□□□□□ -0.16
HOXD3-204ENST00000459979 A0A0B4J293 547 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 INS-IGF2F8WCM5 200 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 OR2C1O95371 312 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 IGHV3-23P01764 117 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 SP6Q3SY56 376 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 SLC25A24Q6NUK1 477 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 OR2C3Q8N628 320 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 ZNF114Q8NC26 417 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 OR2K2Q8NGT1 345 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 GLYATL2Q8WU03 294 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 DEDD2Q8WXF8 326 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 TRIM63Q969Q1 353 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 SCGB3A2Q96PL1 93 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 NAA60Q9H7X0 242 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 SMAD5-AS1Q9Y6J3 95 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 S4R3C0 116 aa14.05□□□□□ -0.16
HOXD3-204ENST00000459979 TEX13DA0A0J9YY54 714 aaPredicted RBP14.04□□□□□ -0.16
HOXD3-204ENST00000459979 CRYM-AS1A6NIL9 109 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 HLA-AP01891 365 aaKnown RBP14.04□□□□□ -0.16
HOXD3-204ENST00000459979 AKR1C2P52895 323 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 DHODHQ02127 395 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 KLF9Q13886 244 aaPredicted RBP14.04□□□□□ -0.16
HOXD3-204ENST00000459979 ZNF79Q15937 498 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 TRIM16LQ309B1 348 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 ADAMTSL5Q6ZMM2 481 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 SBSPONQ8IVN8 264 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 Q8N402 240 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 GAR1Q9NY12 217 aaKnown RBP14.04□□□□□ -0.16
HOXD3-204ENST00000459979 STAB2Q8WWQ8 2551 aa14.04□□□□□ -0.16
HOXD3-204ENST00000459979 A8MWP6 167 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 OR5AC1P0C628 307 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 AP3S2P59780 193 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 IZUMO4Q1ZYL8 232 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 FAM106AQ4KMX7 169 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 AARDQ4LEZ3 155 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 PYDC2Q56P42 97 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 CASC10Q5T4H9 136 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 HAPLN4Q86UW8 402 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 FAM219AQ8IW50 185 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 MUC7Q8TAX7 377 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 RRNAD1Q96FB5 475 aaKnown RBP14.03□□□□□ -0.16
HOXD3-204ENST00000459979 GALNT14Q96FL9 552 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 RCHY1Q96PM5 261 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 NDUFA13Q9P0J0 144 aa14.03□□□□□ -0.16
HOXD3-204ENST00000459979 C2orf70A6NJV1 201 aa14.02□□□□□ -0.17
HOXD3-204ENST00000459979 K7EIM0 57 aa14.02□□□□□ -0.17
HOXD3-204ENST00000459979 GPR183P32249 361 aa14.02□□□□□ -0.17
HOXD3-204ENST00000459979 FAUP35544 74 aaKnown RBP14.02□□□□□ -0.17
HOXD3-204ENST00000459979 LCN12Q6JVE5 192 aa14.02□□□□□ -0.17
HOXD3-204ENST00000459979 Q8N1Y9 231 aa14.02□□□□□ -0.17
HOXD3-204ENST00000459979 SCARB1Q8WTV0 552 aa14.02□□□□□ -0.17
HOXD3-204ENST00000459979 TMEM56-RWDD3S4R434 201 aa14.02□□□□□ -0.17
HOXD3-204ENST00000459979 TGOLN2O43493 480 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 FCGR2BP31994 310 aaPredicted RBP14.01□□□□□ -0.17
HOXD3-204ENST00000459979 ERHP84090 104 aaKnown RBP14.01□□□□□ -0.17
HOXD3-204ENST00000459979 SPANXN2Q5MJ10 180 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 SPSB3Q6PJ21 355 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 SGPP2Q8IWX5 399 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 SELENOHQ8IZQ5 122 aaKnown RBP14.01□□□□□ -0.17
HOXD3-204ENST00000459979 TOMM5Q8N4H5 51 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 LHFPL5Q8TAF8 219 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 RBPMSQ93062 196 aaKnown RBP14.01□□□□□ -0.17
HOXD3-204ENST00000459979 TMEM230Q96A57 120 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 BSCL2Q96G97 398 aaPredicted RBP14.01□□□□□ -0.17
HOXD3-204ENST00000459979 ZNF436Q9C0F3 470 aaPredicted RBP14.01□□□□□ -0.17
HOXD3-204ENST00000459979 PLEKHA3Q9HB20 300 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 MCUBQ9NWR8 336 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 C21orf62Q9NYP8 219 aa14.01□□□□□ -0.17
HOXD3-204ENST00000459979 TECRQ9NZ01 308 aaKnown RBP14.01□□□□□ -0.17
HOXD3-204ENST00000459979 TENM2Q9NT68 2774 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 A0A0G2JRQ6 117 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 F8W735 103 aaPredicted RBP14□□□□□ -0.17
HOXD3-204ENST00000459979 ST8SIA3O43173 380 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 FOLR2P14207 255 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 ELLP55199 621 aaPredicted RBP14□□□□□ -0.17
HOXD3-204ENST00000459979 PVRIGQ6DKI7 326 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 PLET1Q6UQ28 207 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 Q6ZRM9 215 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 IL22RA2Q969J5 263 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 KCNIP3Q9Y2W7 256 aa14□□□□□ -0.17
HOXD3-204ENST00000459979 TMEM213A2RRL7 107 aa13.99□□□□□ -0.17
HOXD3-204ENST00000459979 A8MZ25 164 aa13.99□□□□□ -0.17
HOXD3-204ENST00000459979 I3L2K1 104 aa13.99□□□□□ -0.17
HOXD3-204ENST00000459979 CBLN1P23435 193 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms